RNA–Protein interactions for RNA: ENST00000443213.5

SRSF7-208, Transcript of serine and arginine rich splicing factor 7, human

TSL 5

Gene SRSF7, Length 1,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF7-208	ENST00000443213	RPL34	P49207	117 aa	Known RBP	11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	TKTL1	P51854	596 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	SLC5A3	P53794	718 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	RPL10A	P62906	217 aa	Known RBP	11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	RBM10	P98175	930 aa	Known RBP	11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	ADIG	Q0VDE8	80 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	TWF1	Q12792	350 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	IFRD2	Q12894	506 aa	Predicted RBP	11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	RAB41	Q5JT25	222 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	C10orf76	Q5T2E6	689 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	H2AFV	Q71UI9	128 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	IPO4	Q8TEX9	1081 aa	Known RBP	11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	FBXW11	Q9UKB1	542 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	YIPF1	Q9Y548	306 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	INSL5	Q9Y5Q6	135 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	VCAN	P13611	3396 aa		11.16	□□□□□ -0.62
SRSF7-208	ENST00000443213	PAPSS1	O43252	624 aa	Predicted RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ACADSB	P45954	432 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	GABRB2	P47870	512 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	USP46	P62068	366 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	MTMR3	Q13615	1198 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	DUSP6	Q16828	381 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ZNF697	Q5TEC3	545 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	LIN9	Q5TKA1	542 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	PPP1R2P3	Q6NXS1	205 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	DENND5B	Q6ZUT9	1274 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	KIAA1328	Q86T90	577 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	NUP93	Q8N1F7	819 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	SIX6OS1	Q8N1H7	587 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	MSANTD4	Q8NCY6	345 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	CLEC4C	Q8WTT0	213 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	SLC22A17	Q8WUG5	538 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	NDRG1	Q92597	394 aa	Known RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ZNF653	Q96CK0	615 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	VCPIP1	Q96JH7	1222 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	SPATA17	Q96L03	361 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	LACRT	Q9GZZ8	138 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	IGFLR1	Q9H665	355 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	LUC7L	Q9NQ29	371 aa	Known RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	MAN1C1	Q9NR34	630 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	MYO1A	Q9UBC5	1043 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	PPP2R2C	Q9Y2T4	447 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	DUSP10	Q9Y6W6	482 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ZNF638	Q14966	1978 aa	Known RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ABL1	P00519	1130 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	CALB1	P05937	261 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	USP17L7	P0C7H9	530 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	VAV2	P52735	878 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	SNX16	P57768	344 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	GPC5	P78333	572 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ADGRE1	Q14246	886 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	TCEAL5	Q5H9L2	206 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	OR6B2	Q6IFH4	312 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	CCDC149	Q6ZUS6	474 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	FAM183BP	Q6ZVS7	135 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	XYLT1	Q86Y38	959 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	PPP2R3C	Q969Q6	453 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ARHGEF26	Q96DR7	871 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	PIWIL1	Q96J94	861 aa	Known RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	ULBP1	Q9BZM6	244 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	PLEKHA4	Q9H4M7	779 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	NSUN3	Q9H649	340 aa	Known RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	CYLD	Q9NQC7	956 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	TRMT1	Q9NXH9	659 aa	Known RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	CNOT8	Q9UFF9	292 aa	Known RBP	11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	STRIP2	Q9ULQ0	834 aa		11.15	□□□□□ -0.62
SRSF7-208	ENST00000443213	GREB1	Q4ZG55	1949 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	GOLGA8S	H3BPF8	625 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	RFPL2	O75678	378 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	ZBED1	O96006	694 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	C1R	P00736	705 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	TMEM253	P0C7T8	217 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	MYBL1	P10243	752 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	IGFBP4	P22692	258 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	EPHB3	P54753	998 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	MAMLD1	Q13495	774 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	ZNF268	Q14587	947 aa	Predicted RBP	11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	TAF5	Q15542	800 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	OLFML1	Q6UWY5	402 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	VN1R2	Q8NFZ6	395 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	TRIM11	Q96F44	468 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	CNGB3	Q9NQW8	809 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	TRIM10	Q9UDY6	481 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	INTU	Q9ULD6	942 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	USP3	Q9Y6I4	520 aa		11.14	□□□□□ -0.63
SRSF7-208	ENST00000443213	SLC38A8	A6NNN8	435 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	GJB6	O95452	261 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	LRG1	P02750	347 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	CYP1A2	P05177	515 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	RNASE9	P60153	205 aa	Known RBP	11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	MRPS5	P82675	430 aa	Known RBP	11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	HYAL1	Q12794	435 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	KIF5A	Q12840	1032 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	KCNC3	Q14003	757 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	VEPH1	Q14D04	833 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	PPM1L	Q5SGD2	360 aa		11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.13	□□□□□ -0.63
SRSF7-208	ENST00000443213		Q7L0L9	218 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms