RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 ABL1P00519 1130 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 ADH5P11766 374 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 HOXB3P14651 431 aaPredicted RBP13.91□□□□□ -0.18
SP4-203ENST00000440636 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
SP4-203ENST00000440636 TXLNAP40222 546 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 TNFRSF4P43489 277 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 KDSRQ06136 332 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 SURF1Q15526 300 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 TDRD10Q5VZ19 366 aaKnown RBP13.91□□□□□ -0.18
SP4-203ENST00000440636 LYSMD4Q5XG99 296 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 KIAA1211LQ6NV74 962 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 CCDC73Q6ZRK6 1079 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 TRAPPC11Q7Z392 1133 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 PIP4P1Q86T03 277 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 DDX42Q86XP3 938 aaKnown RBP eCLIP13.91□□□□□ -0.18
SP4-203ENST00000440636 WDR49Q8IV35 697 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 GLIS3Q8NEA6 775 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 ZFRQ96KR1 1074 aaKnown RBP13.91□□□□□ -0.18
SP4-203ENST00000440636 SLITRK1Q96PX8 696 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 NEUROG3Q9Y4Z2 214 aa13.91□□□□□ -0.18
SP4-203ENST00000440636 ATXN2Q99700 1313 aaKnown RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 ITPR1Q14643 2758 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 TCRBV21S2A2A0A5A6 115 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 UPK3BL1B0FP48 263 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 UPK3BL2E5RIL1 263 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 HYAL3O43820 417 aaPredicted RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 MBL2P11226 248 aaPredicted RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 ITPKAP23677 461 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 HOXD12P35452 270 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 HOXD13P35453 343 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 DPP6P42658 865 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 SEMA3BQ13214 749 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 BYSLQ13895 437 aaKnown RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 COL9A2Q14055 689 aaPredicted RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 LY6G5CQ5SRR4 150 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 HS2ST1Q7LGA3 356 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 ETFBKMTQ8IXQ9 262 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 ZCCHC14Q8WYQ9 949 aaKnown RBP13.9□□□□□ -0.18
SP4-203ENST00000440636 ZNF518BQ9C0D4 1074 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 DPEP3Q9H4B8 488 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 HSPBP1Q9NZL4 362 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 TBC1D14Q9P2M4 693 aa13.9□□□□□ -0.18
SP4-203ENST00000440636 SPAARA0A1B0GVQ0 90 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 E2F8A0AVK6 867 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 VPS37CA5D8V6 355 aaPredicted RBP13.89□□□□□ -0.19
SP4-203ENST00000440636 FAM163BP0C2L3 166 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 PTPN1P18031 435 aaKnown RBP13.89□□□□□ -0.19
SP4-203ENST00000440636 STAT6P42226 847 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 GAD2Q05329 585 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 IFRD2Q12894 506 aaPredicted RBP13.89□□□□□ -0.19
SP4-203ENST00000440636 NUP93Q8N1F7 819 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 PGBD3Q8N328 593 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 OR6B3Q8NGW1 331 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 HPS3Q969F9 1004 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 OTUB2Q96DC9 234 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 B3GNT5Q9BYG0 378 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 PANK2Q9BZ23 570 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 FSCN3Q9NQT6 498 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 KLK13Q9UKR3 277 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 HCN2Q9UL51 889 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 MSRB2Q9Y3D2 182 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 CEP192Q8TEP8 1941 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 ADAMTS9Q9P2N4 1935 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 PCDH15Q96QU1 1955 aa13.89□□□□□ -0.19
SP4-203ENST00000440636 LOC400499M0QZD8 3231 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 TBC1D3BA6NDS4 549 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 CLDN5O00501 218 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 HOXC11O43248 304 aaPredicted RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 AP5Z1O43299 807 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 COCHO43405 550 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 TULP3O75386 442 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 CFIP05156 583 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 DLATP10515 647 aaKnown RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 YWHAQP27348 245 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 CEBPZQ03701 1054 aaKnown RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 DUOXA1Q1HG43 343 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 WDR72Q3MJ13 1102 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 FAM173BQ6P4H8 233 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 ZNF513Q8N8E2 541 aaPredicted RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 B3GALNT2Q8NCR0 500 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 CEP76Q8TAP6 659 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 KCNV2Q8TDN2 545 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 FBXO32Q969P5 355 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 CAPN10Q9HC96 672 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 KIAA1586Q9HCI6 787 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 SLC6A14Q9UN76 642 aa13.88□□□□□ -0.19
SP4-203ENST00000440636 MORC2Q9Y6X9 1032 aaPredicted RBP13.88□□□□□ -0.19
SP4-203ENST00000440636 RTN3O95197 1032 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms