RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 FAM186BQ8IYM0 893 aa17.83■□□□□ 0.44
COL16A1-204ENST00000440437 SCAMP5Q8TAC9 235 aa17.83■□□□□ 0.44
COL16A1-204ENST00000440437 ZFRQ96KR1 1074 aaKnown RBP17.83■□□□□ 0.44
COL16A1-204ENST00000440437 SMOQ99835 787 aa17.83■□□□□ 0.44
COL16A1-204ENST00000440437 APOBEC3GQ9HC16 384 aaKnown RBP17.83■□□□□ 0.44
COL16A1-204ENST00000440437 POLR3BQ9NW08 1133 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-204ENST00000440437 COMMD8Q9NX08 183 aa17.83■□□□□ 0.44
COL16A1-204ENST00000440437 SMPD4Q9NXE4 827 aa17.83■□□□□ 0.44
COL16A1-204ENST00000440437 COCHO43405 550 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 LRP3O75074 770 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 BEST1O76090 585 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 ZDHHC11BP0C7U3 371 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 MBL2P11226 248 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-204ENST00000440437 GCLMP48507 274 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 RSPO4Q2I0M5 234 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-204ENST00000440437 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-204ENST00000440437 DDX42Q86XP3 938 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL16A1-204ENST00000440437 RPLP0P6Q8NHW5 317 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 SLC2A14Q8TDB8 520 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 TAS1R2Q8TE23 839 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 TWNKQ96RR1 684 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 FAM49BQ9NUQ9 324 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 CFAP97Q9P2B7 532 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 USP18Q9UMW8 372 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 SLC8A2Q9UPR5 921 aa17.82■□□□□ 0.44
COL16A1-204ENST00000440437 KRT13P13646 458 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 RPL13P26373 211 aaKnown RBP17.81■□□□□ 0.44
COL16A1-204ENST00000440437 PSMC2P35998 433 aaKnown RBP17.81■□□□□ 0.44
COL16A1-204ENST00000440437 PXNP49023 591 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-204ENST00000440437 TUBP50607 506 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 LMNB2Q03252 620 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 SPEM2Q0P670 501 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 ADAM9Q13443 819 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 EDRF1Q3B7T1 1238 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 SYT13Q7L8C5 426 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 SMYD4Q8IYR2 804 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-204ENST00000440437 ADGRG2Q8IZP9 1017 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 FMR1NBQ8N0W7 255 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-204ENST00000440437 CAMKK1Q8N5S9 505 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 C12orf29Q8N999 325 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 GAB3Q8WWW8 586 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 IMPG2Q9BZV3 1241 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 GMIPQ9P107 970 aa17.81■□□□□ 0.44
COL16A1-204ENST00000440437 CHORDC1Q9UHD1 332 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-204ENST00000440437 SLC9A3R1O14745 358 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-204ENST00000440437 SCAMP3O14828 347 aaKnown RBP17.8■□□□□ 0.44
COL16A1-204ENST00000440437 PNOCQ13519 176 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 DHCR24Q15392 516 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 HECTD3Q5T447 861 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 CEP68Q76N32 757 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 DGLUCYQ7Z3D6 616 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-204ENST00000440437 WHAMMQ8TF30 809 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 ACDQ96AP0 544 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 HHIPQ96QV1 700 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 DUSP9Q99956 384 aaKnown RBP17.8■□□□□ 0.44
COL16A1-204ENST00000440437 NIF3L1Q9GZT8 377 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 CCSER2Q9H7U1 834 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 CYP3A43Q9HB55 503 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 TMEM8AQ9HCN3 771 aa17.8■□□□□ 0.44
COL16A1-204ENST00000440437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.8■□□□□ 0.44
COL16A1-204ENST00000440437 E2F8A0AVK6 867 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 PRR5-ARHGAP8B1AHC4 643 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 HHLA1C9JL84 531 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 K7EQS6 105 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 CILPO75339 1184 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 ADORA2BP29275 332 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 EIF2DP41214 584 aaKnown RBP17.79■□□□□ 0.44
COL16A1-204ENST00000440437 PGFP49763 221 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 MAP3K7CLP57077 242 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 ARHGAP8P85298 464 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 DMC1Q14565 340 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 CLEC20AQ6ZU45 233 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 GPRIN1Q7Z2K8 1008 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 USP33Q8TEY7 942 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 HNRNPABQ99729 332 aaKnown RBP17.79■□□□□ 0.44
COL16A1-204ENST00000440437 MMRN2Q9H8L6 949 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 SEMA4GQ9NTN9 838 aa17.79■□□□□ 0.44
COL16A1-204ENST00000440437 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.79■□□□□ 0.44
COL16A1-204ENST00000440437 ANTXRLA6NF34 631 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 RPP40O75818 363 aaKnown RBP17.78■□□□□ 0.44
COL16A1-204ENST00000440437 FAM200BP0CF97 657 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 CHRM1P11229 460 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-204ENST00000440437 GTF2H1P32780 548 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 MESP2Q0VG99 397 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 COBLL1Q53SF7 1204 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 KRT39Q6A163 491 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 RHBDF2Q6PJF5 856 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 C12orf40Q86WS4 652 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 OTUB2Q96DC9 234 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 CCDC34Q96HJ3 373 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 NT5C1AQ9BXI3 368 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 FBXO44Q9H4M3 255 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 PNPLA8Q9NP80 782 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 TBC1D14Q9P2M4 693 aa17.78■□□□□ 0.44
COL16A1-204ENST00000440437 PLXND1Q9Y4D7 1925 aa17.77■□□□□ 0.44
COL16A1-204ENST00000440437 MED19A0JLT2 244 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-204ENST00000440437 AXIN1O15169 862 aa17.77■□□□□ 0.44
COL16A1-204ENST00000440437 TRIM21P19474 475 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms