RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PCSK9Q8NBP7 692 aaKnown RBP26.89■■□□□ 1.89
CPNE1-216ENST00000437340 B3GALNT2Q8NCR0 500 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 SLC2A14Q8TDB8 520 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 CFAP57Q96MR6 1250 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 LPIN3Q9BQK8 851 aa26.89■■□□□ 1.89
CPNE1-216ENST00000437340 NOVA2Q9UNW9 492 aaKnown RBP26.89■■□□□ 1.89
CPNE1-216ENST00000437340 GABRDO14764 452 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 THP07101 528 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 MLH1P40692 756 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 ATP1A2P50993 1020 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 CDH6P55285 790 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 DYNLT1P63172 113 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 TFDP2Q14188 446 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 TAF5Q15542 800 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 LRRC31Q6UY01 552 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 OSTM1Q86WC4 334 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 ZCCHC9Q8N567 271 aaKnown RBP26.88■■□□□ 1.89
CPNE1-216ENST00000437340 ADAM7Q9H2U9 754 aa26.88■■□□□ 1.89
CPNE1-216ENST00000437340 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.88■■□□□ 1.89
CPNE1-216ENST00000437340 TPX2Q9ULW0 747 aaKnown RBP26.88■■□□□ 1.89
CPNE1-216ENST00000437340 XPO1O14980 1071 aaKnown RBP26.87■■□□□ 1.89
CPNE1-216ENST00000437340 EIF3HO15372 352 aaKnown RBP eCLIP26.87■■□□□ 1.898e-7■■□□□ 13.6
CPNE1-216ENST00000437340 TTC4O95801 387 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 IVLP07476 585 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 RAB27AP51159 221 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 RNF180Q86T96 592 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 GLIS1Q8NBF1 620 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 FAM172AQ8WUF8 416 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 TMEM121Q9BTD3 319 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 CALN1Q9BXU9 219 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 MAK16Q9BXY0 300 aaKnown RBP26.87■■□□□ 1.89
CPNE1-216ENST00000437340 GRIN2DO15399 1336 aa26.87■■□□□ 1.89
CPNE1-216ENST00000437340 SGK1O00141 431 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 ZNF623O75123 536 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 CAND2O75155 1236 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 SLC8A3P57103 927 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 MORF4L2Q15014 288 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 PTGISQ16647 500 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 CDO1Q16878 200 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 TMEM86AQ8N2M4 240 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 GAD1Q99259 594 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 C11orf84Q9BUA3 381 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-216ENST00000437340 B3GNT5Q9BYG0 378 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 NGRNQ9NPE2 291 aaKnown RBP26.86■■□□□ 1.89
CPNE1-216ENST00000437340 DNAH12Q6ZR08 3092 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 MDM4O15151 490 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 HPDP32754 393 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-216ENST00000437340 THPOP40225 353 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 PPP2R2AP63151 447 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 ATP11AP98196 1134 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 GPS1Q13098 491 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 DPYSL3Q14195 570 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 CENPIQ92674 756 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-216ENST00000437340 DUSP16Q9BY84 665 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 STMN4Q9H169 189 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-216ENST00000437340 AGO3Q9H9G7 860 aaKnown RBP26.86■■□□□ 1.89
CPNE1-216ENST00000437340 LRRC4CQ9HCJ2 640 aa26.86■■□□□ 1.89
CPNE1-216ENST00000437340 MEIS3P2A8K0S8 358 aa26.85■■□□□ 1.89
CPNE1-216ENST00000437340 ZNF487B1APH4 448 aa26.85■■□□□ 1.89
CPNE1-216ENST00000437340 PTPN1P18031 435 aaKnown RBP26.85■■□□□ 1.89
CPNE1-216ENST00000437340 RPL9P32969 192 aaKnown RBP26.85■■□□□ 1.89
CPNE1-216ENST00000437340 MDH1P40925 334 aaKnown RBP26.85■■□□□ 1.89
CPNE1-216ENST00000437340 MAGOHP61326 146 aaKnown RBP26.85■■□□□ 1.89
CPNE1-216ENST00000437340 PCGF5Q86SE9 256 aa26.85■■□□□ 1.89
CPNE1-216ENST00000437340 PRUNE1Q86TP1 453 aa26.85■■□□□ 1.89
CPNE1-216ENST00000437340 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.85■■□□□ 1.896e-9■□□□□ 10.4
CPNE1-216ENST00000437340 ARL5CA6NH57 179 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 SRRM3A6NNA2 597 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-216ENST00000437340 RASGRF2O14827 1237 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 MCF2LO15068 1137 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 CABYRO75952 493 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 AGTP01019 485 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 LHX1P48742 406 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 KRT81Q14533 505 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 EFHC1Q5JVL4 640 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 WSCD1Q658N2 575 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 MFSD5Q6N075 450 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 SENP8Q96LD8 212 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 DDX23Q9BUQ8 820 aaKnown RBP26.84■■□□□ 1.89
CPNE1-216ENST00000437340 SAE1Q9UBE0 346 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-216ENST00000437340 SLC12A6Q9UHW9 1150 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 PADI3Q9ULW8 664 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 SHOC2Q9UQ13 582 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 RGS16O15492 202 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-216ENST00000437340 ZSCAN5DPP0CG00 497 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 LCP1P13796 627 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 TKTP29401 623 aaKnown RBP26.84■■□□□ 1.89
CPNE1-216ENST00000437340 PTK7Q13308 1070 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 RAB6CQ53S08 254 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 UBAP2Q5T6F2 1119 aaKnown RBP26.84■■□□□ 1.89
CPNE1-216ENST00000437340 SCYL2Q6P3W7 929 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 AGMOQ6ZNB7 445 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 FUKQ8N0W3 1084 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 RNF157Q96PX1 679 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 RAB6CQ9H0N0 254 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 CNOT10Q9H9A5 744 aaKnown RBP26.84■■□□□ 1.89
CPNE1-216ENST00000437340 NINJ2Q9NZG7 142 aa26.84■■□□□ 1.89
CPNE1-216ENST00000437340 TCEA3O75764 348 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 ETS1P14921 441 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 RDXP35241 583 aaKnown RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms