RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CAPN10Q9HC96 672 aa15.8■□□□□ 0.12
HDAC8-213ENST00000436675 CALCOCO1Q9P1Z2 691 aa15.8■□□□□ 0.12
HDAC8-213ENST00000436675 PTPRJQ12913 1337 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 TRIM24O15164 1050 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 SH3BP5O60239 455 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 PFKLP17858 780 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 GJB2P29033 226 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 LONP1P36776 959 aaKnown RBP15.79■□□□□ 0.12
HDAC8-213ENST00000436675 EIF2DP41214 584 aaKnown RBP15.79■□□□□ 0.12
HDAC8-213ENST00000436675 CASP5P51878 434 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 CACNA2D1P54289 1103 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 MYO1EQ12965 1108 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 ZNF423Q2M1K9 1284 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 PEAR1Q5VY43 1037 aaPredicted RBP15.79■□□□□ 0.12
HDAC8-213ENST00000436675 PHTF2Q8N3S3 785 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 ANKRD36BP1Q96IX9 119 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 EPSTI1Q96J88 318 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 KIF2CQ99661 725 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 TTLL2Q9BWV7 592 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 STRA6Q9BX79 667 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 CYP8B1Q9UNU6 501 aa15.79■□□□□ 0.12
HDAC8-213ENST00000436675 A0A0A0MRY4 1105 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 ARHGAP33O14559 1287 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 TRIM66O15016 1216 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 LDHAP00338 332 aaKnown RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 OAS1P00973 400 aaKnown RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 CAPNS1P04632 268 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 HOXB2P14652 356 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 GARTP22102 1010 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 HOXD12P35452 270 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 TRIP6Q15654 476 aaKnown RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 MAPRE1Q15691 268 aaKnown RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 COL28A1Q2UY09 1125 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 SOWAHCQ53LP3 525 aaPredicted RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 C10orf76Q5T2E6 689 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 TDRD10Q5VZ19 366 aaKnown RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 SLC36A4Q6YBV0 504 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 PDZD3Q86UT5 571 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 SLC41A1Q8IVJ1 513 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 TRIML1Q8N9V2 468 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 MYCBPAPQ8TBZ2 947 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 HSPA12BQ96MM6 686 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 MRPL45Q9BRJ2 306 aaKnown RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 FGFBP2Q9BYJ0 223 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 INTS13Q9NVM9 706 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 GPSM3Q9Y4H4 160 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 NME7Q9Y5B8 376 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 PCDHB9Q9Y5E1 797 aa15.78■□□□□ 0.12
HDAC8-213ENST00000436675 GOLGA4Q13439 2230 aaKnown RBP15.78■□□□□ 0.12
HDAC8-213ENST00000436675 PTPRBP23467 1997 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 MYH10P35580 1976 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 IGHV1OR15-9A0A0B4J2B8 117 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 FAM221BA6H8Z2 402 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 CLDN5O00501 218 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 EIF5BO60841 1220 aaKnown RBP15.77■□□□□ 0.12
HDAC8-213ENST00000436675 TULP3O75386 442 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 OLFM2O95897 454 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 TNNC2P02585 160 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 IRF1P10914 325 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 IDEP14735 1019 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 NOP14P78316 857 aaKnown RBP15.77■□□□□ 0.12
HDAC8-213ENST00000436675 GAD2Q05329 585 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 ANO4Q32M45 955 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 PLEKHG6Q3KR16 790 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 BTBD8Q5XKL5 378 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 DPH6Q7L8W6 267 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 MIB1Q86YT6 1006 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 RGL4Q8IZJ4 473 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 WBP2Q969T9 261 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 SLITRK1Q96PX8 696 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 ACOX2Q99424 681 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 ZNF518BQ9C0D4 1074 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 SLC6A17Q9H1V8 727 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 SNX25Q9H3E2 840 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 CD93Q9NPY3 652 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 TMEM30AQ9NV96 361 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 EHD2Q9NZN4 543 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 TBC1D14Q9P2M4 693 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 DEC1Q9P2X7 70 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 HCN2Q9UL51 889 aa15.77■□□□□ 0.12
HDAC8-213ENST00000436675 PRPF6O94906 941 aaKnown RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 SYPP08247 313 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 FTH1P19P0C7X4 201 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 GAP43P17677 238 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 WARSP23381 471 aaKnown RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 MAOBP27338 520 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 GNL1P36915 607 aaPredicted RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 PPP3CCP48454 512 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 SF3A1Q15459 793 aaKnown RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 EGFLAMQ63HQ2 1017 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 LIMS2Q7Z4I7 341 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 DDX42Q86XP3 938 aaKnown RBP eCLIP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 TMEM25Q86YD3 366 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 BBS7Q8IWZ6 715 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 GPD1LQ8N335 351 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 OR6B3Q8NGW1 331 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 HNRNPLLQ8WVV9 542 aaKnown RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 FBXO32Q969P5 355 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 DNAJC19Q96DA6 116 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms