RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 SPATA31D3P0C874 917 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 RNASE9P60153 205 aaKnown RBP22.44■■□□□ 1.18
YBX1-203ENST00000436427 RPL7AP62424 266 aaKnown RBP22.44■■□□□ 1.18
YBX1-203ENST00000436427 PDE12Q6L8Q7 609 aaKnown RBP22.44■■□□□ 1.18
YBX1-203ENST00000436427 SPATA31D4Q6ZUB0 917 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 NYAP1Q6ZVC0 841 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 TPCN2Q8NHX9 752 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 SCAMP5Q8TAC9 235 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 NDRG1Q92597 394 aaKnown RBP22.44■■□□□ 1.18
YBX1-203ENST00000436427 BTBD6Q96KE9 485 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 CNGB3Q9NQW8 809 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 HSFX1Q9UBD0 423 aa22.44■■□□□ 1.18
YBX1-203ENST00000436427 SIGLEC16A6NMB1 481 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 TNFRSF10BO14763 440 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 PALMO75781 387 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 ZBED1O96006 694 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 HADHBP55084 474 aaKnown RBP22.43■■□□□ 1.18
YBX1-203ENST00000436427 MRPS5P82675 430 aaKnown RBP22.43■■□□□ 1.18
YBX1-203ENST00000436427 TAF5Q15542 800 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 PPP1R15BQ5SWA1 713 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 NUP93Q8N1F7 819 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 GIPC2Q8TF65 315 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 CALR3Q96L12 384 aaKnown RBP22.43■■□□□ 1.18
YBX1-203ENST00000436427 TRIM7Q9C029 511 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 MAFFQ9ULX9 164 aa22.43■■□□□ 1.18
YBX1-203ENST00000436427 TMEM110-MUSTN1A8MSY1 372 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 ATF6P18850 670 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 ALDH1A3P47895 512 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 MESDQ14696 234 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 DENND5BQ6ZUT9 1274 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 DAAM2Q86T65 1068 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 SLC35F6Q8N357 371 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 TRIM58Q8NG06 486 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 JOSD2Q8TAC2 188 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 FAM149B1Q96BN6 582 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 SPATA17Q96L03 361 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 YIPF1Q9Y548 306 aa22.42■■□□□ 1.18
YBX1-203ENST00000436427 GRID2IPA4D2P6 1211 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 TMEM191CA6NGB0 347 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 EPOPA6NHQ4 379 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 MYO1FO00160 1098 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 BUB1BO60566 1050 aaPredicted RBP22.41■■□□□ 1.18
YBX1-203ENST00000436427 GLUD1P00367 558 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 RFC1P35251 1148 aaPredicted RBP22.41■■□□□ 1.18
YBX1-203ENST00000436427 DAOAP59103 153 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 EFHC1Q5JVL4 640 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 SLC26A9Q7LBE3 791 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 TCEAL8Q8IYN2 117 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 EMC1Q8N766 993 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 LMAN2LQ9H0V9 348 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 USP3Q9Y6I4 520 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 SART1O43290 800 aaKnown RBP22.41■■□□□ 1.18
YBX1-203ENST00000436427 SCNN1AP37088 669 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 GOLPH3Q9H4A6 298 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 FBXO44Q9H4M3 255 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 TMEM59LQ9UK28 342 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 FBXW11Q9UKB1 542 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 INSL5Q9Y5Q6 135 aa22.41■■□□□ 1.18
YBX1-203ENST00000436427 RFXAPO00287 272 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 RTN3O95197 1032 aaPredicted RBP22.4■■□□□ 1.18
YBX1-203ENST00000436427 CLCN4P51793 760 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 USP46P62068 366 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 ETF1P62495 437 aaKnown RBP22.4■■□□□ 1.18
YBX1-203ENST00000436427 TWF1Q12792 350 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 MTMR3Q13615 1198 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 PTPROQ16827 1216 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 PM20D1Q6GTS8 502 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 LILRA6Q6PI73 481 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 SYT10Q6XYQ8 523 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 SYCE1Q8N0S2 351 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 KREMEN2Q8NCW0 462 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 SLC7A14Q8TBB6 771 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 GOLGA1Q92805 767 aa22.4■■□□□ 1.18
YBX1-203ENST00000436427 MAGED2Q9UNF1 606 aaPredicted RBP22.4■■□□□ 1.18
YBX1-203ENST00000436427 SLC38A8A6NNN8 435 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 YJEFN3A6XGL0 299 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 E7ENQ6 273 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 HSF2BPO75031 334 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 FLT3P36888 993 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 C11orf63Q6NUN7 778 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 RBM23Q86U06 439 aaKnown RBP22.39■■□□□ 1.17
YBX1-203ENST00000436427 SCML4Q8N228 414 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 LRRC57Q8N9N7 239 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 KIF18AQ8NI77 898 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 IRGQQ8WZA9 623 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 KHSRPQ92945 711 aaKnown RBP eCLIP22.39■■□□□ 1.176e-7■■□□□ 13.9
YBX1-203ENST00000436427 CEP295NLQ96MC4 621 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 WDR24Q96S15 920 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 IP6K2Q9UHH9 426 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 DNAI1Q9UI46 699 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 PLXNA3P51805 1871 aa22.39■■□□□ 1.17
YBX1-203ENST00000436427 COL4A4P53420 1690 aaPredicted RBP22.38■■□□□ 1.17
YBX1-203ENST00000436427 PER2O15055 1255 aa22.38■■□□□ 1.17
YBX1-203ENST00000436427 CLASP2O75122 1294 aaKnown RBP22.38■■□□□ 1.17
YBX1-203ENST00000436427 FTCDO95954 541 aa22.38■■□□□ 1.17
YBX1-203ENST00000436427 PDGFRAP16234 1089 aa22.38■■□□□ 1.17
YBX1-203ENST00000436427 GPD1P21695 349 aa22.38■■□□□ 1.17
YBX1-203ENST00000436427 PSMA2P25787 234 aa22.38■■□□□ 1.17
YBX1-203ENST00000436427 YWHAQP27348 245 aa22.38■■□□□ 1.17
YBX1-203ENST00000436427 YWHAZP63104 245 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms