RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GRAP2O75791 330 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 KRT75O95678 551 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 YY1P25490 414 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 STIP1P31948 543 aaKnown RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 MAPKAPK2P49137 400 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 GMPSP49915 693 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PTK7Q13308 1070 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CCNJLQ8IV13 435 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 STAG2Q8N3U4 1231 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 FRMD8P1Q9BZ68 369 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 SOHLH2Q9NX45 425 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 MTO1Q9Y2Z2 717 aaKnown RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PTPRTO14522 1441 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 AIM2O14862 343 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CAPN15O75808 1086 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PAICSP22234 425 aaKnown RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CAMK1Q14012 370 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 HLFQ16534 295 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 RETSATQ6NUM9 610 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 NEK5Q6P3R8 708 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 DEFB128Q7Z7B8 93 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 SLC44A5Q8NCS7 719 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 C3orf20Q8ND61 904 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF669Q96BR6 464 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ELOVL6Q9H5J4 265 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ABCB6Q9NP58 842 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 HSPA13P48723 471 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ALDH9A1P49189 494 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 TBC1D25Q3MII6 688 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 DENND1BQ6P3S1 775 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CYP20A1Q6UW02 462 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 RTL3Q8N8U3 475 aaKnown RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 GLMNQ92990 594 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CRELD1Q96HD1 420 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 SH3GL3Q99963 347 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 SNX8Q9Y5X2 465 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PHF20L1A8MW92 1017 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PHF2O75151 1096 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CNOT3O75175 753 aaKnown RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CHRNB3Q05901 458 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CCDC144BQ3MJ40 725 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CCDC81Q6ZN84 652 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 MIB1Q86YT6 1006 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 MED8Q96G25 268 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 FAM167BQ9BTA0 163 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 IL1RL2Q9HB29 575 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 GBA2Q9HCG7 927 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PITPNM2Q9BZ72 1349 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ZMYM2Q9UBW7 1377 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 COPZ1P61923 177 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PLOD1Q02809 727 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 XRCC4Q13426 336 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 KCNS3Q9BQ31 491 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ADAM21Q9UKJ8 722 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ENTPD4Q9Y227 616 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF711Q9Y462 761 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 MANSC4A6NHS7 340 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 H7C1W4 665 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 CYB561D2O14569 222 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PSMC6P62333 389 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ACOX1Q15067 660 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ZNHIT3Q15649 155 aaPredicted RBP11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PNMA5Q96PV4 448 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 PLA2G6O60733 806 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 RRM1P23921 792 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 DSG3P32926 999 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 SUSD6Q92537 303 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 RBM15Q96T37 977 aaKnown RBP eCLIP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 KIFC1Q9BW19 673 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 OSBPL1AQ9BXW6 950 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 PRRG4Q9BZD6 226 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 KCTD10Q9H3F6 313 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 C21orf59P57076 290 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 COX10Q12887 443 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 ALX1Q15699 326 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 C3orf62Q6ZUJ4 267 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 ERO1BQ86YB8 467 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 EPHX4Q8IUS5 362 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF512BQ96KM6 892 aaPredicted RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 ILKAPQ9H0C8 392 aaPredicted RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 RAD21L1Q9H4I0 556 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 SPG21Q9NZD8 308 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 PSME2Q9UL46 239 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 TIMM44O43615 452 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 DNAJB2P25686 324 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 NUP107P57740 925 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 GJC2Q5T442 439 aaPredicted RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 GAS2L3Q86XJ1 694 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 DEFB129Q9H1M3 183 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 COPG2Q9UBF2 871 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 TRIM49BA6NDI0 452 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 PQBP1O60828 265 aaKnown RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 STAU1O95793 577 aaKnown RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 UMPSP11172 480 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 TLX1P31314 330 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms