RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 BRD9Q9H8M2 597 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 KIF9Q9HAQ2 790 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 HEBP1Q9NRV9 189 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 TDP1Q9NUW8 608 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 COMMD8Q9NX08 183 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 LIMA1Q9UHB6 759 aaKnown RBP19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 CHORDC1Q9UHD1 332 aaPredicted RBP19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 DNAJC12Q9UKB3 198 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 FHOD1Q9Y613 1164 aa19.96■□□□□ 0.79
RPUSD3-207ENST00000433555 DPYSL4O14531 572 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 PTMSP20962 102 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 MFAP3P55082 362 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 BST2Q10589 180 aaKnown RBP19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 MLF2Q15773 248 aaPredicted RBP19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 RAB41Q5JT25 222 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 SNX30Q5VWJ9 437 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 LCLAT1Q6UWP7 414 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 ENOSF1Q7L5Y1 443 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 FBXL6Q8N531 539 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 DNASE1L2Q92874 299 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 GANQ9H2C0 597 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 TBC1D17Q9HA65 648 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 RAPGEFL1Q9UHV5 662 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 ARHGAP26Q9UNA1 814 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 SCML2Q9UQR0 700 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 USP3Q9Y6I4 520 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 ZDBF2Q9HCK1 2354 aa19.95■□□□□ 0.78
RPUSD3-207ENST00000433555 A0A1W2PQH9 124 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 M0QYV0 167 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 ZNF263O14978 683 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 XPO1O14980 1071 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 CHADO15335 359 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 COCHO43405 550 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 GABBR2O75899 941 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 HDCP19113 662 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 PPP3CCP48454 512 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 SLC7A9P82251 487 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 TNK2Q07912 1038 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 ZSCAN23Q3MJ62 389 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 TRIM68Q6AZZ1 485 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 BHLHA9Q7RTU4 235 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 SCD5Q86SK9 330 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 YAF2Q8IY57 180 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 TMEM105Q8N8V8 129 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 SECISBP2LQ93073 1101 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 ZFRQ96KR1 1074 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 FBXO44Q9H4M3 255 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 SMPD4Q9NXE4 827 aa19.94■□□□□ 0.78
RPUSD3-207ENST00000433555 KIAA1549LQ6ZVL6 1849 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 SCAMP3O14828 347 aaKnown RBP19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 EPHB6O15197 1021 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 PLA2G4AP47712 749 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 PFKPQ01813 784 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 MTF1Q14872 753 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 IQCB1Q15051 598 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 SLC44A4Q53GD3 710 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 KLHDC7AQ5VTJ3 777 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 DENND1BQ6P3S1 775 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 TPRG1Q6ZUI0 275 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 CCDC186Q7Z3E2 898 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 TTC16Q8NEE8 873 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 FLCNQ8NFG4 579 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 TTC8Q8TAM2 541 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 SH3RF2Q8TEC5 729 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 NDRG1Q92597 394 aaKnown RBP19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 NAA15Q9BXJ9 866 aaKnown RBP19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 FOXQ1Q9C009 403 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 HPS4Q9NQG7 708 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 HESX1Q9UBX0 185 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 KIAA1257Q9ULG3 409 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 SIK3Q9Y2K2 1263 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 CPQQ9Y646 472 aa19.93■□□□□ 0.78
RPUSD3-207ENST00000433555 LGALS16A8MUM7 142 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 LEFTY2O00292 366 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 PI15O43692 258 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 SETSIPP0DME0 302 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 MBL2P11226 248 aaPredicted RBP19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 ARSAP15289 507 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 TCF3P15923 654 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 PFKLP17858 780 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 GNA15P30679 374 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 USP8P40818 1118 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 SOX9P48436 509 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 RGS7P49802 495 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 ZNF165P49910 485 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 TUBP50607 506 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 TKTL1P51854 596 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 ADIGQ0VDE8 80 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 CNGA2Q16280 664 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 ARHGAP29Q52LW3 1261 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 HECTD3Q5T447 861 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 IRF7Q92985 503 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 WBP2Q969T9 261 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 FAM83CQ9BQN1 747 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 DDX23Q9BUQ8 820 aaKnown RBP19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 ULBP1Q9BZM6 244 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 UBXN6Q9BZV1 441 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 NAT10Q9H0A0 1025 aaKnown RBP19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 MFSD1Q9H3U5 465 aa19.92■□□□□ 0.78
RPUSD3-207ENST00000433555 GTSE1Q9NYZ3 720 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms