RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 AGPAT3Q9NRZ7 376 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 KLHL11Q9NVR0 708 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 COMMD8Q9NX08 183 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 IL1RAPL1Q9NZN1 696 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SLC24A2Q9UI40 661 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 HAO1Q9UJM8 370 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 VAV3Q9UKW4 847 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 MAGED1Q9Y5V3 778 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 GREB1LQ9C091 1923 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF646O15015 1829 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ABHD14A-ACY1A0A1B0GW23 586 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 RASA4BC9J798 803 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 MEIS2O14770 477 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 GIPC1O14908 333 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 RASA4O43374 803 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 FAM155BO75949 473 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 EPHB2P29323 1055 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SREBF1P36956 1147 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CLCN2P51788 898 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 RAP1GDS1P52306 607 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 BPIFB3P59826 476 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 RPL26P61254 145 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ENPEPQ07075 957 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 MUM1Q2TAK8 710 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 GNPTABQ3T906 1256 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 PABPC1LQ4VXU2 614 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SGO2Q562F6 1265 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SNX30Q5VWJ9 437 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 OTOP3Q7RTS5 596 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CLNKQ7Z7G1 428 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ADGRG6Q86SQ4 1221 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 TXNRD3Q86VQ6 643 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SRRM1Q8IYB3 904 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 GJD3Q8N144 294 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF276Q8N554 614 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ZCCHC9Q8N567 271 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SLC17A8Q8NDX2 589 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 UHMK1Q8TAS1 419 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 GDAP1Q8TB36 358 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF564Q8TBZ8 553 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ATP6V1E2Q96A05 226 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SLC10A4Q96EP9 437 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 HSD17B14Q9BPX1 270 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 EIF2AK1Q9BQI3 630 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 BTBD10Q9BSF8 475 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 RUSC1Q9BVN2 902 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 EPB41L1Q9H4G0 881 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SYNCQ9H7C4 482 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 C17orf75Q9HAS0 396 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 DLGAP2Q9P1A6 1054 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 LARSQ9P2J5 1176 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 ARHGAP28Q9P2N2 729 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 EPS15L1Q9UBC2 864 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SCAF8Q9UPN6 1271 aaKnown RBP8.43□□□□□ -1.06
VTI1A-202ENST00000432306 DMTF1Q9Y222 760 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 SPEF1Q9Y4P9 236 aa8.43□□□□□ -1.06
VTI1A-202ENST00000432306 CUL9Q8IWT3 2517 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 ATRNL1Q5VV63 1379 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 F5H6K3 240 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 WNT10BO00744 389 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 GSC2O15499 205 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 MAGEC1O60732 1142 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 TNFRSF21O75509 655 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 CSDE1O75534 798 aaKnown RBP8.42□□□□□ -1.06
VTI1A-202ENST00000432306 ATF2P15336 505 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 KLRC2P26717 231 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 BTDP43251 543 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 KCNJ1P48048 391 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 CDR2Q01850 454 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 CETN1Q12798 172 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 PABPC4Q13310 644 aaKnown RBP eCLIP8.42□□□□□ -1.064e-7■■■□□ 17.1
VTI1A-202ENST00000432306 ALCAMQ13740 583 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 LAMB3Q13751 1172 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 PRKG1Q13976 671 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 MINDY4Q4G0A6 757 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 KHDC1Q4VXA5 237 aaKnown RBP8.42□□□□□ -1.06
VTI1A-202ENST00000432306 DAB2IPQ5VWQ8 1189 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 FOXB2Q5VYV0 432 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 TRIM68Q6AZZ1 485 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 LRRC74BQ6ZQY2 392 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 NLRP9Q7RTR0 991 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 ARHGAP22Q7Z5H3 698 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 MAPKAPK5Q8IW41 473 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 STKLD1Q8NE28 680 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 ZSWIM2Q8NEG5 633 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 ADAM32Q8TC27 787 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 CD99L2Q8TCZ2 262 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 SLC20A1Q8WUM9 679 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 SHC3Q92529 594 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-202ENST00000432306 RNF166Q96A37 237 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-202ENST00000432306 RBM41Q96IZ5 413 aaKnown RBP8.42□□□□□ -1.06
VTI1A-202ENST00000432306 PCDHB18PQ96TA0 734 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 CADM1Q9BY67 442 aaKnown RBP8.42□□□□□ -1.06
VTI1A-202ENST00000432306 TRIM4Q9C037 500 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 VPS11Q9H270 941 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 PARVGQ9HBI0 331 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 ANAPC5Q9UJX4 755 aa8.42□□□□□ -1.06
VTI1A-202ENST00000432306 FRMPD2Q68DX3 1309 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms