RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 C2orf16Q68DN1 1984 aa15.34■□□□□ 0.05
SGCE-204ENST00000428696 DOCK6Q96HP0 2047 aa15.33■□□□□ 0.05
SGCE-204ENST00000428696 TRAV19A0A0A6YYK7 116 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 LRRC53A6NM62 1247 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 ZBED1O96006 694 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 MMEP08473 750 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 CCDC172P0C7W6 258 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 PPP3CCP48454 512 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 KIF11P52732 1056 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 ASIC2Q16515 512 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 SFMBT2Q5VUG0 894 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 TANGO2Q6ICL3 276 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 MTSS1LQ765P7 747 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 MON1AQ86VX9 555 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 SCUBE3Q8IX30 993 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 SLC20A1Q8WUM9 679 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 SLC35F5Q8WV83 523 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 SMARCD2Q92925 531 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 RPP25Q9BUL9 199 aaKnown RBP15.33■□□□□ 0.04
SGCE-204ENST00000428696 PNPLA8Q9NP80 782 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 SMPD4Q9NXE4 827 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 NUDT5Q9UKK9 219 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 VCANP13611 3396 aa15.33■□□□□ 0.04
SGCE-204ENST00000428696 A0A1W2PQH9 124 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 FERP16591 822 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 GPD2P43304 727 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 PLA2G4AP47712 749 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 PGFP49763 221 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 PKDCCQ504Y2 493 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 HECTD3Q5T447 861 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 RSRC2Q7L4I2 434 aaKnown RBP15.32■□□□□ 0.04
SGCE-204ENST00000428696 YAF2Q8IY57 180 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 TMEM35BQ8NCS4 154 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 FGF14Q92915 247 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 ASB16Q96NS5 453 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 NOX5Q96PH1 765 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 MUTYHQ9UIF7 546 aa15.32■□□□□ 0.04
SGCE-204ENST00000428696 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.32■□□□□ 0.04
SGCE-204ENST00000428696 TADA3O75528 432 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 TBX18O95935 607 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 TPM1P09493 284 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 MBL2P11226 248 aaPredicted RBP15.31■□□□□ 0.04
SGCE-204ENST00000428696 DDX6P26196 483 aaKnown RBP eCLIP15.31■□□□□ 0.04
SGCE-204ENST00000428696 GRM2Q14416 872 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 C10orf120Q5SQS8 335 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 CMTM8Q8IZV2 173 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 C1orf131Q8NDD1 294 aaKnown RBP15.31■□□□□ 0.04
SGCE-204ENST00000428696 EPS8L1Q8TE68 723 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 CPA5Q8WXQ8 436 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 GOLGA1Q92805 767 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 PPP1R13BQ96KQ4 1090 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 SLC22A12Q96S37 553 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 CCSER2Q9H7U1 834 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 IL37Q9NZH6 218 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 CYTH4Q9UIA0 394 aa15.31■□□□□ 0.04
SGCE-204ENST00000428696 LUC7L2Q9Y383 392 aaKnown RBP15.31■□□□□ 0.04
SGCE-204ENST00000428696 MYH10P35580 1976 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 AP5Z1O43299 807 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 RALAP11233 206 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 SKILP12757 684 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 RARGP13631 454 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 TNFAIP3P21580 790 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 PBX1P40424 430 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 ACADSBP45954 432 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 SNX16P57768 344 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 YWHAGP61981 247 aaKnown RBP eCLIP15.3■□□□□ 0.04
SGCE-204ENST00000428696 CDR2Q01850 454 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 TSR1Q2NL82 804 aaKnown RBP15.3■□□□□ 0.04
SGCE-204ENST00000428696 NAA35Q5VZE5 725 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 TMC6Q7Z403 805 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 FMNL3Q8IVF7 1028 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 DRC7Q8IY82 874 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 ARHGAP18Q8N392 663 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 SLC44A3Q8N4M1 653 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 WDTC1Q8N5D0 677 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 RNF139Q8WU17 664 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 OVCA2Q8WZ82 227 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 BAP1Q92560 729 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 EDEM1Q92611 657 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 FAM149B1Q96BN6 582 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 HSFY1Q96LI6 401 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 COL25A1Q9BXS0 654 aaPredicted RBP15.3■□□□□ 0.04
SGCE-204ENST00000428696 PLA2G2FQ9BZM2 168 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 RNF38Q9H0F5 515 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 LHX5Q9H2C1 402 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 NMUR1Q9HB89 426 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 TDP1Q9NUW8 608 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 IGSF9Q9P2J2 1179 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 PCDHGC3Q9UN70 934 aa15.3■□□□□ 0.04
SGCE-204ENST00000428696 HEPACAM2A8MVW5 462 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 E5RJQ4 531 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 COCHO43405 550 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 TLR5O60602 858 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 GABBR2O75899 941 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 PRAMEF12O95522 483 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 IRF1P10914 325 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 868.7 ms