RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 TMEM8AQ9HCN3 771 aa20.22■□□□□ 0.83
AL954642.1-201ENST00000428088 POLR3BQ9NW08 1133 aaPredicted RBP20.22■□□□□ 0.83
AL954642.1-201ENST00000428088 IL37Q9NZH6 218 aa20.22■□□□□ 0.83
AL954642.1-201ENST00000428088 RALGAPA1Q6GYQ0 2036 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 COCHO43405 550 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 ATG13O75143 517 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 PRCPP42785 496 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 PXNP49023 591 aaPredicted RBP20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 ENPEPQ07075 957 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 ENGASEQ8NFI3 743 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 RMDN1Q96DB5 314 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 RMND1Q9NWS8 449 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 GMIPQ9P107 970 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 CFAP97Q9P2B7 532 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 GMEB2Q9UKD1 530 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 SLC8A2Q9UPR5 921 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 CEP250Q9BV73 2442 aa20.21■□□□□ 0.83
AL954642.1-201ENST00000428088 CETN3O15182 167 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 CD58P19256 250 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 HOXA6P31267 233 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 CNR2P34972 360 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 INCA1Q0VD86 236 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 FBXO43Q4G163 708 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 HECTD3Q5T447 861 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 KRT39Q6A163 491 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 WDR5BQ86VZ2 330 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 ADGRG2Q8IZP9 1017 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 CCDC150Q8NCX0 1101 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 RPLP0P6Q8NHW5 317 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 NT5C1AQ9BXI3 368 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 NIF3L1Q9GZT8 377 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 CCSER2Q9H7U1 834 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 CYP3A43Q9HB55 503 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 CSNK1G1Q9HCP0 422 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 COMMD8Q9NX08 183 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 SDK1Q7Z5N4 2213 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 KIAA1549LQ6ZVL6 1849 aa20.2■□□□□ 0.82
AL954642.1-201ENST00000428088 FAM92AA1XBS5 289 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 CYP17A1P05093 508 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 FAM200BP0CF97 657 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 EPB41P11171 864 aaKnown RBP20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 GTF2H1P32780 548 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 OPRD1P41143 372 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 PGFP49763 221 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 MCCD1P59942 119 aaPredicted RBP20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 ZNF658Q5TYW1 1059 aaPredicted RBP20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 SNX30Q5VWJ9 437 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 LAIR1Q6GTX8 287 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 WHAMMQ8TF30 809 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 SEMA4DQ92854 862 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 JAKMIP2Q96AA8 810 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 CYFIP2Q96F07 1278 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 GSDMAQ96QA5 445 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 HNRNPABQ99729 332 aaKnown RBP20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 PCDHA5Q9Y5H7 936 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 EML5Q05BV3 1969 aa20.19■□□□□ 0.82
AL954642.1-201ENST00000428088 SLC9A3R1O14745 358 aaPredicted RBP20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 CILPO75339 1184 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 ZDHHC11BP0C7U3 371 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 TRIM21P19474 475 aaKnown RBP20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 TGM1P22735 817 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 DHCR24Q15392 516 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 GAB4Q2WGN9 574 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 CLEC20AQ6ZU45 233 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 GPR161Q8N6U8 529 aaKnown RBP20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 KIAA1958Q8N8K9 716 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 ZFRQ96KR1 1074 aaKnown RBP20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 FBXO44Q9H4M3 255 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 USP18Q9UMW8 372 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 SPAG17Q6Q759 2223 aa20.18■□□□□ 0.82
AL954642.1-201ENST00000428088 SMC2O95347 1197 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 MXI1P50539 228 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 PMS1P54277 932 aaKnown RBP20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 SPEM2Q0P670 501 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 ZNF394Q53GI3 561 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 ANKRD40Q6AI12 368 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 RHBDF2Q6PJF5 856 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 CEP68Q76N32 757 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 GPRIN1Q7Z2K8 1008 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 SMARCE1Q969G3 411 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 HHIPQ96QV1 700 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 TSG101Q99816 390 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 PARD6AQ9NPB6 346 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 RAB20Q9NX57 234 aa20.17■□□□□ 0.82
AL954642.1-201ENST00000428088 ANTXRLA6NF34 631 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 HHLA1C9JL84 531 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 K7EQS6 105 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 RETP07949 1114 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 SLC6A11P48066 632 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 TUBP50607 506 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 SEC13P55735 322 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 RSPO4Q2I0M5 234 aaPredicted RBP20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 COBLL1Q53SF7 1204 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 ISM2Q6H9L7 571 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 FBXL13Q8NEE6 735 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 SPATA20Q8TB22 786 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 WBP2Q969T9 261 aa20.16■□□□□ 0.82
AL954642.1-201ENST00000428088 TIGD1Q96MW7 591 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms