RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 DSEQ9UL01 958 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 PCDHA4Q9UN74 947 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ARHGAP26Q9UNA1 814 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 PCDHB1Q9Y5F3 818 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 EDIL3O43854 480 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 FSBPO95073 299 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 MT-CO3P00414 261 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 MCF2P10911 925 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 TPMTP51580 245 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 ERVPABLB-1P60509 514 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 DAB2P98082 770 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 PPP2R3AQ06190 1150 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 ILKQ13418 452 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 NCAPHQ15003 741 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 IGFBP7Q16270 282 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 XKR4Q5GH76 650 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 LY6G5CQ5SRR4 150 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 PRAMEF14Q5SWL7 426 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 CHD1LQ86WJ1 897 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 PTRH1Q86Y79 214 aaKnown RBP6.79□□□□□ -1.32
SDCBP-203ENST00000424270 ADGRG2Q8IZP9 1017 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 BLIDQ8IZY5 108 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 TMEM130Q8N3G9 435 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 TERB1Q8NA31 727 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 TMC2Q8TDI7 906 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 SIPA1Q96FS4 1042 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 HIC2Q96JB3 615 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 PSMG3-AS1Q96PY0 264 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 DEPDC7Q96QD5 511 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 ACOX2Q99424 681 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 NAP1L4Q99733 375 aaKnown RBP6.79□□□□□ -1.32
SDCBP-203ENST00000424270 TM9SF3Q9HD45 589 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 DNAJC17Q9NVM6 304 aaKnown RBP6.79□□□□□ -1.32
SDCBP-203ENST00000424270 TRPM5Q9NZQ8 1165 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 UBQLN1Q9UMX0 589 aaKnown RBP6.79□□□□□ -1.32
SDCBP-203ENST00000424270 CPQQ9Y646 472 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 NOTCH2Q04721 2471 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 CREBBPQ92793 2442 aa6.79□□□□□ -1.32
SDCBP-203ENST00000424270 ZNF638Q14966 1978 aaKnown RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 ATMQ13315 3056 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 PTPRDP23468 1912 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 PLXND1Q9Y4D7 1925 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 CYB561D2O14569 222 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 SLC27A2O14975 620 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 TULP3O75386 442 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 AGFG2O95081 481 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 GJB6O95452 261 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 MBL2P11226 248 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 GCFC2P16383 781 aaKnown RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 CKMT2P17540 419 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 GRIK1P39086 918 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 GRIA4P48058 902 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 ARRB1P49407 418 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 GUCY2FP51841 1108 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 E2F1Q01094 437 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 INSM1Q01101 510 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 MYL7Q01449 175 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 STRN3Q13033 797 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 NFE2Q16621 373 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 GAB4Q2WGN9 574 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 C3orf38Q5JPI3 329 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 RNF20Q5VTR2 975 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 RHBDF2Q6PJF5 856 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 PADI6Q6TGC4 694 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 MPZL3Q6UWV2 235 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 XKR5Q6UX68 686 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 DHX32Q7L7V1 743 aaKnown RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 NEK8Q86SG6 692 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 DDX42Q86XP3 938 aaKnown RBP eCLIP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 MIB1Q86YT6 1006 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 SPATA2LQ8IUW3 424 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 TRIM22Q8IYM9 498 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 DCBLD1Q8N8Z6 715 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 RDH13Q8NBN7 331 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 OXER1Q8TDS5 423 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 LRRC15Q8TF66 581 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 ACO2Q99798 780 aaKnown RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 PYM1Q9BRP8 204 aaKnown RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 ABCG4Q9H172 646 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 OSBPL3Q9H4L5 887 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 POLR1BQ9H9Y6 1135 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 POLD4Q9HCU8 107 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 KCNMB3Q9NPA1 279 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 TMPRSS4Q9NRS4 437 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 TBC1D14Q9P2M4 693 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 PCDHA12Q9UN75 941 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 SH3BP1Q9Y3L3 701 aa6.78□□□□□ -1.32
SDCBP-203ENST00000424270 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-203ENST00000424270 PHLPP2Q6ZVD8 1323 aa6.77□□□□□ -1.32
SDCBP-203ENST00000424270 MGAQ8IWI9 3026 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 A0A0A0MRY4 1105 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 A0A1B0GTQ1 180 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 C2orf72A6NCS6 295 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 TADA3O75528 432 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 NOL4O94818 638 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 LYPLA2O95372 231 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 CXCL8P10145 99 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 CYP2F1P24903 491 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms