RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 SPDYCQ5MJ68 293 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 KIAA1324Q6UXG2 1013 aaKnown RBP9.99□□□□□ -0.81
LINC01238-201ENST00000416204 SLC36A4Q6YBV0 504 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 DENND5BQ6ZUT9 1274 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 TOGARAM2Q6ZUX3 1019 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 SFR1Q86XK3 245 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 ZCCHC9Q8N567 271 aaKnown RBP9.99□□□□□ -0.81
LINC01238-201ENST00000416204 RASSF8Q8NHQ8 419 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 KBTBD7Q8WVZ9 684 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 PCIF1Q9H4Z3 704 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 BLOC1S4Q9NUP1 217 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 TMEM30AQ9NV96 361 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 KCND2Q9NZV8 630 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 SIX4Q9UIU6 781 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 LIMCH1Q9UPQ0 1083 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 ANAPC1Q9H1A4 1944 aa9.99□□□□□ -0.81
LINC01238-201ENST00000416204 MYOFQ9NZM1 2061 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 HELZP42694 1942 aaKnown RBP9.98□□□□□ -0.81
LINC01238-201ENST00000416204 PLXNB3Q9ULL4 1909 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 MEI4A8MW99 385 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 WASH3PC4AMC7 463 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 CLDN5O00501 218 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 SLC9A3R1O14745 358 aaPredicted RBP9.98□□□□□ -0.81
LINC01238-201ENST00000416204 NDUFS2O75306 463 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 IL18RAPO95256 599 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 TCF3P15923 654 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 PCSK1P29120 753 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 DPP6P42658 865 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 MAGEA11P43364 429 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 PDE6CP51160 858 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 FAM171BQ6P995 826 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 HS2ST1Q7LGA3 356 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 DYMQ7RTS9 669 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 CACUL1Q86Y37 369 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 TMEM25Q86YD3 366 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 BBS7Q8IWZ6 715 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 TMEM86AQ8N2M4 240 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 CXorf38Q8TB03 319 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 PIP4K2CQ8TBX8 421 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 BHMTQ93088 406 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 LLPHQ9BRT6 129 aaKnown RBP9.98□□□□□ -0.81
LINC01238-201ENST00000416204 PDE11AQ9HCR9 933 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 CACNA2D2Q9NY47 1150 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 RBAKQ9NYW8 714 aaPredicted RBP9.98□□□□□ -0.81
LINC01238-201ENST00000416204 DEC1Q9P2X7 70 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 PCOLCE2Q9UKZ9 415 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
LINC01238-201ENST00000416204 FNDC3AQ9Y2H6 1198 aaKnown RBP9.98□□□□□ -0.81
LINC01238-201ENST00000416204 STYXL1Q9Y6J8 313 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 PTPRJQ12913 1337 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 ASXL3Q9C0F0 2248 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 ACACAQ13085 2346 aa9.98□□□□□ -0.81
LINC01238-201ENST00000416204 A0A1W2PQD8 194 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 TRABD2BA6NFA1 517 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 GABRDO14764 452 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 COCHO43405 550 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 CBFA2T3O75081 653 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 OAS1P00973 400 aaKnown RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 NTSR1P30989 418 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 LHX1P48742 406 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 CLDN6P56747 220 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 RBP5P82980 135 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 GAD2Q05329 585 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 HNRNPDQ14103 355 aaKnown RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 BTBD8Q5XKL5 378 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 SLFN12LQ6IEE8 588 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 BRSK2Q8IWQ3 736 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 ETFBKMTQ8IXQ9 262 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 CHPFQ8IZ52 775 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 TOP6BLQ8N6T0 577 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 LRRC52Q8N7C0 313 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 GLIS3Q8NEA6 775 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 OR5B17Q8NGF7 314 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 IPO4Q8TEX9 1081 aaKnown RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 RAD54LQ92698 747 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 PCED1BQ96HM7 432 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 FUBP3Q96I24 572 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 SPATA17Q96L03 361 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 MMS19Q96T76 1030 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 ZNF518BQ9C0D4 1074 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 DPEP3Q9H4B8 488 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 GAREM1Q9H706 876 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 CCSER2Q9H7U1 834 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 DNAJC17Q9NVM6 304 aaKnown RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 GDAP2Q9NXN4 497 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 CHORDC1Q9UHD1 332 aaPredicted RBP9.97□□□□□ -0.81
LINC01238-201ENST00000416204 BTBD3Q9Y2F9 522 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 NME7Q9Y5B8 376 aa9.97□□□□□ -0.81
LINC01238-201ENST00000416204 CEP192Q8TEP8 1941 aa9.96□□□□□ -0.81
LINC01238-201ENST00000416204 CFAP46Q8IYW2 2715 aa9.96□□□□□ -0.81
LINC01238-201ENST00000416204 A0A0A0MRY4 1105 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 PRRT4C9JH25 899 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 NEDD8-MDP1E9PL57 170 aa9.96□□□□□ -0.82
LINC01238-201ENST00000416204 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms