RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 RPL21P46778 160 aaKnown RBP12.13□□□□□ -0.47
RFFL-205ENST00000415395 GABRB2P47870 512 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 PEX5P50542 639 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 SNX16P57768 344 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 RIPK1Q13546 671 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 ZNF268Q14587 947 aaPredicted RBP12.13□□□□□ -0.47
RFFL-205ENST00000415395 UPP1Q16831 310 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 STK32AQ8WU08 396 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 SEPT8Q92599 483 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 TMEM161AQ9NX61 479 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 KANSL3Q9P2N6 904 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 SLC12A4Q9UP95 1085 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 NR2E1Q9Y466 385 aa12.13□□□□□ -0.47
RFFL-205ENST00000415395 CYB561D2O14569 222 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 GABRDO14764 452 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 NDC80O14777 642 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 LHX1P48742 406 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
RFFL-205ENST00000415395 CLCNKBP51801 687 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 PTPN20Q4JDL3 420 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 TNFAIP8L3Q5GJ75 292 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 RTN4RL1Q86UN2 441 aaPredicted RBP12.12□□□□□ -0.47
RFFL-205ENST00000415395 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 RNF169Q8NCN4 708 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.12□□□□□ -0.47
RFFL-205ENST00000415395 FEZF2Q8TBJ5 459 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 MDM1Q8TC05 714 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 URGCPQ8TCY9 931 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 LINC01599Q8WXQ3 324 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 CD101Q93033 1021 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 SNF8Q96H20 258 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 SENP8Q96LD8 212 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 FOXP3Q9BZS1 431 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 CXorf56Q9H5V9 222 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 RNF19AQ9NV58 838 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 IP6K2Q9UHH9 426 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
RFFL-205ENST00000415395 SMIM23A6NLE4 172 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 NBNO60934 754 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 PROSCO94903 275 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 CXCL10P02778 98 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 SSTR3P32745 418 aaPredicted RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 CETN2P41208 172 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 ORC1Q13415 861 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 AUHQ13825 339 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 ACOT1Q86TX2 421 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 LRRC34Q8IZ02 419 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 GPATCH11Q8N954 259 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 GRAMD1AQ96CP6 724 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 PRMT1Q99873 361 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 SEMA4AQ9H3S1 761 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 CD248Q9HCU0 757 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 MCM8Q9UJA3 840 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 DSEQ9UL01 958 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 USP15Q9Y4E8 981 aaPredicted RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 TMEM191CA6NGB0 347 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 SIGLEC16A6NMB1 481 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 TMEM189-UBE2V1I3L0A0 370 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 FSCN2O14926 492 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 HOXA2O43364 376 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 ATP2C2O75185 946 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 TCEA3O75764 348 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 HSPA8P11142 646 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 FGFR1P11362 822 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 ODC1P11926 461 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 BCAT1P54687 386 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 PPP1R26Q5T8A7 1209 aaPredicted RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 ARHGEF18Q6ZSZ5 1173 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 RIBC1Q8N443 379 aaPredicted RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 NIPA2Q8N8Q9 360 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 KRT35Q92764 455 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 ELAC2Q9BQ52 826 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 SYNCQ9H7C4 482 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 ASIC3Q9UHC3 531 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
RFFL-205ENST00000415395 TPX2Q9ULW0 747 aaKnown RBP12.11□□□□□ -0.47
RFFL-205ENST00000415395 TTC3P53804 2025 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 CASTOR2A6NHX0 329 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 M0QZQ0 153 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 PSTPIP1O43586 416 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 POMCP01189 267 aa12.1□□□□□ -0.47
RFFL-205ENST00000415395 CYP11A1P05108 521 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms