RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ARHGAP44Q17R89 818 aa26.68■■□□□ 1.86
CPNE1-207ENST00000414664 GJB7Q6PEY0 223 aa26.68■■□□□ 1.86
CPNE1-207ENST00000414664 PIGZQ86VD9 579 aa26.68■■□□□ 1.86
CPNE1-207ENST00000414664 VPS16Q9H269 839 aa26.68■■□□□ 1.86
CPNE1-207ENST00000414664 OLFM2O95897 454 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 SETSIPP0DME0 302 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 TCF3P15923 654 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 CLCN5P51795 746 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 STARD6P59095 220 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 SLC7A9P82251 487 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 PDE4CQ08493 712 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 FKBP15Q5T1M5 1219 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 ASTLQ6HA08 431 aaPredicted RBP26.67■■□□□ 1.86
CPNE1-207ENST00000414664 AOPEPQ8N6M6 819 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 TFAP2BQ92481 460 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 SIX2Q9NPC8 291 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 LIMA1Q9UHB6 759 aaKnown RBP26.67■■□□□ 1.86
CPNE1-207ENST00000414664 DNAJC12Q9UKB3 198 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.67■■□□□ 1.862e-6■■■■■ 55.4
CPNE1-207ENST00000414664 USP3Q9Y6I4 520 aa26.67■■□□□ 1.86
CPNE1-207ENST00000414664 MED7O43513 233 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 BRD2P25440 801 aaKnown RBP26.66■■□□□ 1.86
CPNE1-207ENST00000414664 USP8P40818 1118 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 PSEN1P49768 467 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 NCAPHQ15003 741 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 CCDC186Q7Z3E2 898 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 UBA3Q8TBC4 463 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 RNF38Q9H0F5 515 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 TBC1D17Q9HA65 648 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 LRRC4Q9HBW1 653 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 HEBP1Q9NRV9 189 aa26.66■■□□□ 1.86
CPNE1-207ENST00000414664 SYCE3A1L190 88 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 ARNTLO00327 626 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 MBL2P11226 248 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-207ENST00000414664 GLULP15104 373 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 PLA2G4AP47712 749 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 MLLT6P55198 1093 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-207ENST00000414664 APBA1Q02410 837 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 KCNMA1Q12791 1236 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 MTF1Q14872 753 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 RAB41Q5JT25 222 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 DDX42Q86XP3 938 aaKnown RBP eCLIP26.65■■□□□ 1.86
CPNE1-207ENST00000414664 SH3RF2Q8TEC5 729 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 SHC3Q92529 594 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 NACA2Q9H009 215 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 GKN1Q9NS71 199 aa26.65■■□□□ 1.86
CPNE1-207ENST00000414664 M0QYV0 167 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 MAN2B1O00754 1011 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 CYP26A1O43174 497 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 AVPR2P30518 371 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 ZNF165P49910 485 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 COPB1P53618 953 aaKnown RBP26.64■■□□□ 1.86
CPNE1-207ENST00000414664 USP4Q13107 963 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 ZNF77Q15935 545 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 PKDCCQ504Y2 493 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 IER5LQ5T953 404 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 TPRG1Q6ZUI0 275 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 ARHGAP18Q8N392 663 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 TTC16Q8NEE8 873 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 KCTD13Q8WZ19 329 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 MSANTD3Q96H12 275 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 ZFYVE19Q96K21 471 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 FUCA2Q9BTY2 467 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 MRPS17Q9Y2R5 130 aaKnown RBP26.64■■□□□ 1.86
CPNE1-207ENST00000414664 CPQQ9Y646 472 aa26.64■■□□□ 1.86
CPNE1-207ENST00000414664 KANSL1LA0AUZ9 987 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 LRRC10BA6NIK2 292 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 COCHO43405 550 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 ZNF18P17022 549 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 AOC1P19801 751 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 GNA15P30679 374 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 TKTL1P51854 596 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 PDGFRLQ15198 375 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 KLHDC7AQ5VTJ3 777 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 CWF19L1Q69YN2 538 aaKnown RBP26.63■■□□□ 1.85
CPNE1-207ENST00000414664 C1orf228Q6PIY5 440 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 ZNF852Q6ZMS4 543 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 TADA2BQ86TJ2 420 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 KIAA1958Q8N8K9 716 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 NELL2Q99435 816 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 FAM83CQ9BQN1 747 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 ZSWIM1Q9BR11 485 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 DDX23Q9BUQ8 820 aaKnown RBP26.63■■□□□ 1.85
CPNE1-207ENST00000414664 LSM14BQ9BX40 385 aaKnown RBP26.63■■□□□ 1.85
CPNE1-207ENST00000414664 C8orf33Q9H7E9 229 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-207ENST00000414664 CCSER2Q9H7U1 834 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 HCN4Q9Y3Q4 1203 aa26.63■■□□□ 1.85
CPNE1-207ENST00000414664 BECN2A8MW95 431 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 LEFTY2O00292 366 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 TULP2O00295 520 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 TLR5O60602 858 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 RALAP11233 206 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 ATP5C1P36542 298 aaKnown RBP26.62■■□□□ 1.85
CPNE1-207ENST00000414664 KPNA1P52294 538 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-207ENST00000414664 MEA1Q16626 185 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 SLC35F5Q8WV83 523 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 ZNF606Q8WXB4 792 aa26.62■■□□□ 1.85
CPNE1-207ENST00000414664 SECISBP2LQ93073 1101 aaKnown RBP26.62■■□□□ 1.85
CPNE1-207ENST00000414664 CDK5RAP1Q96SZ6 601 aaKnown RBP26.62■■□□□ 1.85
CPNE1-207ENST00000414664 PLCB1Q9NQ66 1216 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms