RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 COLCA1Q6ZS62 124 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 Q6ZTC4 211 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 GRAMD1CQ8IYS0 662 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 LINC01465Q8N7H1 131 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZBTB8BQ8NAP8 495 aaPredicted RBP1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 B4GALNT2Q8NHY0 566 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 BRIX1Q8TDN6 353 aaKnown RBP1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 PIGOQ8TEQ8 1089 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 MAML1Q92585 1016 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 HPS3Q969F9 1004 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 TM2D2Q9BX73 214 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 MS4A7Q9GZW8 240 aaPredicted RBP1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 POT1Q9NUX5 634 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 SHOC2Q9UQ13 582 aa1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 DRG1Q9Y295 367 aaKnown RBP1.92□□□□□ -2.1
RNU2-55P-201ENST00000411146 USP19O94966 1318 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 DOCK7Q96N67 2140 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 C4orf47A7E2U8 309 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 B4DGG1 531 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 UBE2Q2LH0YL09 131 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 CLIC1O00299 241 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 BTN3A1O00481 513 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 RRHO14718 337 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SLC28A2O43868 658 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 IL33O95760 270 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 PRKCBP05771 671 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 DLDP09622 509 aaKnown RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 HGFP14210 728 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SCP2P22307 547 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 LRPAP1P30533 357 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 NTSR1P30989 418 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 UQCRC1P31930 480 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 RECQLP46063 649 aaPredicted RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 ME1P48163 572 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 ARFIP2P53365 341 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 PRKAG1P54619 331 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SRSF1Q07955 248 aaKnown RBP eCLIP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 FHL3Q13643 280 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SEMA3AQ14563 771 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 LARS2Q15031 903 aaKnown RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 TWIST1Q15672 202 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 THEMIS2Q5TEJ8 643 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 NUGGCQ68CJ6 796 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 TMEM65Q6PI78 240 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 DCDC5Q6ZRR9 648 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 PTCHD4Q6ZW05 846 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 TFAP2DQ7Z6R9 452 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 GAS2L3Q86XJ1 694 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SFTPA1Q8IWL2 248 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SIRT6Q8N6T7 355 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 C11orf44Q8N8P7 122 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 OR56A3Q8NH54 315 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 MSI2Q96DH6 328 aaKnown RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 HSPBAP1Q96EW2 488 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 LMLNQ96KR4 655 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 LYZL4Q96KX0 146 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 FAM234AQ9H0X4 552 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZMAT3Q9HA38 289 aaKnown RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 ATP6V0A4Q9HBG4 840 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SPC25Q9HBM1 224 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 AGO4Q9HCK5 861 aaKnown RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 WWOXQ9NZC7 414 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 MGAT4CQ9UBM8 478 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 MED16Q9Y2X0 877 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 LUC7L2Q9Y383 392 aaKnown RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 PRKAB1Q9Y478 270 aa1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 SIRT4Q9Y6E7 314 aaPredicted RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 TTBK1Q5TCY1 1321 aaPredicted RBP1.91□□□□□ -2.1
RNU2-55P-201ENST00000411146 A0A088AWK7 358 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZNF814B7Z6K7 855 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 BTBD19C9JJ37 291 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 H7C4K7 107 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 FYB1O15117 783 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 CA12O43570 354 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 PRAMEF2O60811 474 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 CNOT3O75175 753 aaKnown RBP1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 SNUPNO95149 360 aaKnown RBP1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 CREB1P16220 341 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 NCLP19338 710 aaKnown RBP1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 TIRAPP58753 221 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 RAB1AP62820 205 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 ID2Q02363 134 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 EARS2Q5JPH6 523 aaKnown RBP1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 ATAT1Q5SQI0 421 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 DCAF12L1Q5VU92 463 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 SWSAP1Q6NVH7 229 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 RFX6Q8HWS3 928 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 DCP1BQ8IZD4 617 aaKnown RBP1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 MPP5Q8N3R9 675 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 CUL5Q93034 780 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 EDC3Q96F86 508 aaKnown RBP1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZNF479Q96JC4 524 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 ZFYVE19Q96K21 471 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 FYTTD1Q96QD9 318 aaKnown RBP1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 TRIM54Q9BYV2 358 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 SLC12A5Q9H2X9 1139 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 SLCO5A1Q9H2Y9 848 aa1.9□□□□□ -2.11
RNU2-55P-201ENST00000411146 SARS2Q9NP81 518 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms