RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 LUC7LQ9NQ29 371 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.41■□□□□ 0.385e-7■■■■■ 27.3
TSPAN4-208ENST00000409531 EHD2Q9NZN4 543 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 YIPF1Q9Y548 306 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 INSL5Q9Y5Q6 135 aa17.41■□□□□ 0.38
TSPAN4-208ENST00000409531 A0A087X0T9 212 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 SOWAHDA6NJG2 315 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 DCXO43602 365 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 RTN2O75298 545 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 BEST1O76090 585 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 FAM228BP0C875 321 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 CACNA2D1P54289 1103 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 EPHB3P54753 998 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 PDCLQ13371 301 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 VEPH1Q14D04 833 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 ACAD10Q6JQN1 1059 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 ALKBH5Q6P6C2 394 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 PIGZQ86VD9 579 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 TTC9BQ8N6N2 239 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 ZMIZ2Q8NF64 920 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 OLIG1Q8TAK6 271 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 IPO4Q8TEX9 1081 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 CPA5Q8WXQ8 436 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 KCTD13Q8WZ19 329 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 PCDHB18PQ96TA0 734 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 CRISPLD1Q9H336 500 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 SYNCQ9H7C4 482 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 ST7Q9NRC1 585 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 DNMT3BQ9UBC3 853 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 NAGPAQ9UK23 515 aa17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 ARIH1Q9Y4X5 557 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-208ENST00000409531 EIF3CLB5ME19 914 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 NDUFA10O95299 355 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 PTPN2P17706 415 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 GFPT1Q06210 699 aaPredicted RBP17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 SPA17Q15506 151 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 DDR2Q16832 855 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 CCDC122Q5T0U0 273 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 C10orf76Q5T2E6 689 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 PMF1Q6P1K2 205 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 ERICH1Q86X53 443 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 ELMOD1Q8N336 334 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 WDTC1Q8N5D0 677 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 TRIM11Q96F44 468 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 VCPIP1Q96JH7 1222 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 PPP1R13BQ96KQ4 1090 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 EIF3CQ99613 913 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 LRRC4Q9HBW1 653 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 TMEM30AQ9NV96 361 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 COMMD8Q9NX08 183 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 LIMD1Q9UGP4 676 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 MUTYHQ9UIF7 546 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 STRIP2Q9ULQ0 834 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 ASB3Q9Y575 518 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 EPN1Q9Y6I3 576 aaPredicted RBP17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 MYO16Q9Y6X6 1858 aa17.39■□□□□ 0.37
TSPAN4-208ENST00000409531 RTN3O95197 1032 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 LCA5LO95447 670 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 CALB1P05937 261 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 CSH1P0DML2 217 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 CSH2P0DML3 217 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 FSHRP23945 695 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 GBP2P32456 591 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 RPL34P49207 117 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 NTHL1P78549 312 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 TWF1Q12792 350 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 TAF12Q16514 161 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 DENND5BQ6ZUT9 1274 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 TMEM110Q86TL2 294 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 ITIH5Q86UX2 942 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 PHF13Q86YI8 300 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 NUP93Q8N1F7 819 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 SIX6OS1Q8N1H7 587 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 ZNF512Q96ME7 567 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 LRFN3Q9BTN0 628 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 SLC4A5Q9BY07 1137 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 ISCUQ9H1K1 167 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 FBXO44Q9H4M3 255 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 SPTLC3Q9NUV7 552 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 HCFC1R1Q9NWW0 138 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 CYTH4Q9UIA0 394 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 C2orf16Q68DN1 1984 aa17.38■□□□□ 0.37
TSPAN4-208ENST00000409531 TMCO5BA8MYB1 307 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 HHLA1C9JL84 531 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 TULP2O00295 520 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 SOAT2O75908 522 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 FBXO21O94952 628 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 FTLP02792 175 aaPredicted RBP17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 ATF6P18850 670 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 MMP8P22894 467 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 GABRB2P47870 512 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 RGS7P49802 495 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 SLC5A3P53794 718 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 KRT83P78385 493 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 CCZ1BP86790 482 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 CCZ1P86791 482 aaPredicted RBP17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 PTPN20Q4JDL3 420 aa17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 PABPC1LQ4VXU2 614 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-208ENST00000409531 RAB41Q5JT25 222 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms