RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TBKBP1A7MCY6 615 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 HADHAP40939 763 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 MAP3K7CLP57077 242 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 PRKAA1Q13131 559 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 DEPDC1Q5TB30 811 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 DENND1BQ6P3S1 775 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 NCAPG2Q86XI2 1143 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 DHRSXQ8N5I4 330 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
SMPD4-202ENST00000409031 PDCD6IPQ8WUM4 868 aaKnown RBP18.26■□□□□ 0.51
SMPD4-202ENST00000409031 VCPIP1Q96JH7 1222 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 NYAP2Q9P242 653 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 HLA-DPA1P20036 260 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 PTGER2P43116 358 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 NIM1KQ8IY84 436 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 ABHD8Q96I13 439 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 RBBP8Q99708 897 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 MSH4O15457 936 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 ATP6V1G1O75348 118 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
SMPD4-202ENST00000409031 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 BORCS5Q969J3 196 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 SH2D3AQ9BRG2 576 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 C9orf16Q9BUW7 83 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 UBAP1Q9NZ09 502 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 GJB6O95452 261 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 GALK1P51570 392 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 SNX32Q86XE0 403 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DHFR2Q86XF0 187 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 TBC1D16Q8TBP0 767 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 CNPY3Q9BT09 278 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 NOL6Q9H6R4 1146 aaKnown RBP18.25■□□□□ 0.51
SMPD4-202ENST00000409031 ZNF302Q9NR11 478 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 NCKIPSDQ9NZQ3 722 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 VTI1BQ9UEU0 232 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 A0A1B0GW55 424 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 KBTBD13C9JR72 458 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 MTSS1O43312 755 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 MFN2O95140 757 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DUX4L2P0CJ85 424 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DUX4L3P0CJ86 424 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DUX4L4P0CJ87 422 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DUX4L5P0CJ88 424 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DUX4L6P0CJ89 424 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DUX4L7P0CJ90 424 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 IFNA8P32881 189 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 CBX3Q13185 183 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 FBXO33Q7Z6M2 555 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 CBWD2Q8IUF1 395 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DIS3LQ8TF46 1054 aaKnown RBP18.25■□□□□ 0.51
SMPD4-202ENST00000409031 C17orf75Q9HAS0 396 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DUX4Q9UBX2 424 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 V9GYQ6 96 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 CRKP46108 304 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 LAMC2Q13753 1193 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 CCDC153Q494R4 210 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 ZC3H12BQ5HYM0 836 aaKnown RBP18.25■□□□□ 0.51
SMPD4-202ENST00000409031 FBXW8Q8N3Y1 598 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 FAM162AQ96A26 154 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 IFT43Q96FT9 208 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 CBWD1Q9BRT8 395 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 RIC8BQ9NVN3 520 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 DNPEPQ9ULA0 475 aa18.25■□□□□ 0.51
SMPD4-202ENST00000409031 C15orf38-AP3S2A0A0A6YYH1 394 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 KLHL33A6NCF5 533 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TRIM13O60858 407 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 SOX11P35716 441 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 AADACL2Q6P093 401 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 ARPINQ7Z6K5 226 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 SNX19Q92543 992 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TBX20Q9UMR3 447 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TRDMT1O14717 391 aaKnown RBP18.24■□□□□ 0.51
SMPD4-202ENST00000409031 RAD23AP54725 363 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 USP46P62068 366 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 RBBP7Q16576 425 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 IRF2BP2Q7Z5L9 587 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 CAMK1DQ8IU85 385 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 EPAS1Q99814 870 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 PHACTR1Q9C0D0 580 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 DBNDD1Q9H9R9 158 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 PTTG2Q9NZH5 202 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TMEM247A6NEH6 219 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TSHRP16473 764 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 SOX6P35712 828 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 PHKA2P46019 1235 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 PRKAA2P54646 552 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 RAB14P61106 215 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 LPIN1Q14693 890 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 PDK2Q15119 407 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 SF3B3Q15393 1217 aaKnown RBP18.24■□□□□ 0.51
SMPD4-202ENST00000409031 DGUOKQ16854 277 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 OMA1Q96E52 524 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TEX12Q9BXU0 123 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TOPORSQ9NS56 1045 aaPredicted RBP18.24■□□□□ 0.51
SMPD4-202ENST00000409031 AP4B1Q9Y6B7 739 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 ATP8B3O60423 1300 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 IGSF9BQ9UPX0 1349 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TGM2P21980 687 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TPI1P60174 286 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms