RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 SIX2Q9NPC8 291 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 RBM12Q9NTZ6 932 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 RNF14Q9UBS8 474 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 DNM3Q9UQ16 869 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ATP8B3O60423 1300 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 GRID2IPA4D2P6 1211 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 RSPH10B2B2RC85 870 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PDXKO00764 312 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 SLC16A3O15427 465 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ECE2O60344 883 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ENTPD3O75355 529 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 AFPP02771 609 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 MMP10P09238 476 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 RSPH10BP0C881 870 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 SLC9A1P19634 815 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 NR2F2P24468 414 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PON1P27169 355 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ANXA13P27216 316 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 CXCR5P32302 372 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PRKCIP41743 596 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PAFAH1B1P43034 410 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ITGA1P56199 1179 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 KLHL30Q0D2K2 578 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 C10orf76Q5T2E6 689 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 CCDC181Q5TID7 509 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 SDE2Q6IQ49 451 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZNF571Q7Z3V5 609 aaPredicted RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 KRT27Q7Z3Y8 459 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 SAPCD2Q86UD0 394 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAM133AQ8N9E0 248 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 AFAP1L1Q8TED9 768 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 CAVIN3Q969G5 261 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 MS4A14Q96JA4 679 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 INPP4AQ96PE3 977 aaPredicted RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 SH3GL2Q99962 352 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 EIF2AK1Q9BQI3 630 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PACSIN1Q9BY11 444 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAM204AQ9H8W3 233 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 LUC7LQ9NQ29 371 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 TYW1Q9NV66 732 aaKnown RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 SAMD15Q9P1V8 674 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ARMCX3Q9UH62 379 aaPredicted RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 FBXL5Q9UKA1 691 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 AJAP1Q9UKB5 411 aaPredicted RBP7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 SYNPO2Q9UMS6 1093 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
CSNK2A1-204ENST00000400227 ASTN1O14525 1302 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 IGLV3-22A0A075B6J6 115 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 A0A1W2PRG0 241 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 ACOT7O00154 380 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 CES2O00748 559 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 TGFB1I1O43294 461 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 CLSTN1O94985 981 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 FTCDO95954 541 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 NR3C1P04150 777 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 IVLP07476 585 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZBTB48P10074 688 aaPredicted RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 CAPN2P17655 700 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 GAP43P17677 238 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 PTPN1P18031 435 aaKnown RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 POLD1P28340 1107 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 FLT3P36888 993 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 EPHB4P54760 987 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 MRPS25P82663 173 aaKnown RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 NFIL3Q16649 462 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 USH1GQ495M9 461 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 CFAP221Q4G0U5 840 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 DALRD3Q5D0E6 543 aaKnown RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 BTBD8Q5XKL5 378 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 RINT1Q6NUQ1 792 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 EMBQ6PCB8 327 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 LRRC31Q6UY01 552 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 LEKR1Q6ZMV7 388 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 C1orf186Q6ZWK4 172 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 NIM1KQ8IY84 436 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 KYQ8NBH2 561 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 CYP2W1Q8TAV3 490 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 RIN2Q8WYP3 895 aaPredicted RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZNF622Q969S3 477 aaKnown RBP eCLIP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZBTB8AQ96BR9 441 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 BORCS6Q96GS4 357 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 GDAP1L1Q96MZ0 367 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 PSMB7Q99436 277 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 TMX4Q9H1E5 349 aaPredicted RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZHX3Q9H4I2 956 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 METTL14Q9HCE5 456 aaKnown RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 TUFT1Q9NNX1 390 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 GDF3Q9NR23 364 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 BZW2Q9Y6E2 419 aaKnown RBP7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 ZMYM2Q9UBW7 1377 aa7.29□□□□□ -1.24
CSNK2A1-204ENST00000400227 A0A0U1RQG5 324 aaPredicted RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 GTPBP10A4D1E9 387 aaKnown RBP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 GOLGA6BA6NDN3 693 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 FAM90A27PA6NNH2 459 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 KCNK3O14649 394 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 FFAR3O14843 346 aa7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 EIF3DO15371 548 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSNK2A1-204ENST00000400227 SHOX2O60902 331 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms