RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RASGRP4Q8TDF6 673 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 CCDC77Q9BR77 488 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ACPTQ9BZG2 426 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TRIM9Q9C026 710 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.86□□□□□ -1.313e-6■□□□□ 11.1
TM9SF4-202ENST00000398022 REV1Q9UBZ9 1251 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TRPS1Q9UHF7 1281 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 FAM153AQ9UHL3 310 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PLAGL2Q9UPG8 496 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 SLC8A2Q9UPR5 921 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 OPN1MWP04001 364 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 WEE2P0C1S8 567 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 OPN1MW2P0DN77 364 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 OPN1MW3P0DN78 364 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 VAV1P15498 845 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PPP2R2AP63151 447 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ORC2Q13416 577 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 SQSTM1Q13501 440 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 GRM4Q14833 912 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 LRIT3Q3SXY7 679 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 XKR3Q5GH77 459 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 CLVS2Q5SYC1 327 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 RAB11FIP2Q7L804 512 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 SLC51AQ86UW1 340 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 C4orf32Q8N8J7 132 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PPFIBP2Q8ND30 876 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 SPATA4Q8NEY3 305 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 AENQ8WTP8 325 aaKnown RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 GRK7Q8WTQ7 553 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 STARD8Q92502 1023 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ANKRD2Q9GZV1 360 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 SH2D4AQ9H788 454 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 MRPL39Q9NYK5 338 aaKnown RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 GPRC5BQ9NZH0 403 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 FBXO40Q9UH90 709 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ADAMTS1Q9UHI8 967 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 UNC80Q8N2C7 3258 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ABCB11O95342 1321 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 MEN1O00255 615 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 AP3D1O14617 1153 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 MAGEB3O15480 346 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PDPK1O15530 556 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 KLRC4O43908 158 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 LRRN2O75325 713 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ATP5HO75947 161 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 KCNH1O95259 989 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ALBP02768 609 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 CHRNB1P11230 501 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 GAP43P17677 238 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 CHRNA5P30532 468 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 HIBADHP31937 336 aaKnown RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 GDI2P50395 445 aaKnown RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 MLLT6P55198 1093 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 GNGT1P63211 74 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 S100A12P80511 92 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 NNTQ13423 1086 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TLR1Q15399 786 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TEAD4Q15561 434 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 FOXR1Q6PIV2 292 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 HHIPL2Q6UWX4 724 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 CLVS1Q8IUQ0 354 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 WDR49Q8IV35 697 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 CCNYL1Q8N7R7 359 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 CCDC127Q96BQ5 260 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 NSMCE3Q96MG7 304 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 PIP5K1AQ99755 562 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 GCOM2Q9BZD3 368 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TTYH3Q9C0H2 523 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 NDST4Q9H3R1 872 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TMEM206Q9H813 350 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 FAM207AQ9NSI2 230 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 BMP2KQ9NSY1 1161 aaPredicted RBP6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 TBCCD1Q9NVR7 557 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 STK17AQ9UEE5 414 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 RNF112Q9ULX5 631 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 ERVK-19Q9WJR5 959 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 LEMD3Q9Y2U8 911 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 NOX1Q9Y5S8 564 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 MYH13Q9UKX3 1938 aa6.86□□□□□ -1.31
TM9SF4-202ENST00000398022 A0A1B0GWJ7 208 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 E2F8A0AVK6 867 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ARHGEF37A1IGU5 675 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 PP2D1A8MPX8 630 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 L7N2F9 121 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 AREL1O15033 823 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF185O15231 689 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 SHOX2O60902 331 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CLN5O75503 358 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 FAM13AO94988 1023 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 NTSR2O95665 410 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 BAG3O95817 575 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 PABPC4LP0CB38 370 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 KELP23276 732 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ATP2B4P23634 1241 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ACADVLP49748 655 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 LRRC63Q05C16 580 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms