RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 GDPD5Q8WTR4 605 aa10.25□□□□□ -0.77
TRIM39-203ENST00000396547 CSRNP1Q96S65 589 aa10.25□□□□□ -0.77
TRIM39-203ENST00000396547 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
TRIM39-203ENST00000396547 EHMT1Q9H9B1 1298 aa10.25□□□□□ -0.77
TRIM39-203ENST00000396547 TMEM165Q9HC07 324 aa10.25□□□□□ -0.77
TRIM39-203ENST00000396547 SCAF8Q9UPN6 1271 aaKnown RBP10.25□□□□□ -0.77
TRIM39-203ENST00000396547 AK5Q9Y6K8 562 aa10.25□□□□□ -0.77
TRIM39-203ENST00000396547 hCG_1818297A0A087WSY0 165 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 PROCP04070 461 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 FAM200BP0CF97 657 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 LIG4P49917 911 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 SLC18A1P54219 525 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 BPIFB4P59827 614 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ORC1Q13415 861 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 KRT72Q14CN4 511 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 TRMT5Q32P41 509 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 USP37Q86T82 979 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 GPD1LQ8N335 351 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 NAT14Q8WUY8 206 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ITFG2Q969R8 447 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 APOPT1Q96IL0 206 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 HHIPL1Q96JK4 782 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 PCDH9Q9HC56 1237 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 NMRK2Q9NPI5 230 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 APPL1Q9UKG1 709 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 CXorf49A8MYA2 514 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ZNF862O60290 1169 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 CD19P15391 556 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 PSMA2P25787 234 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 EIF3EP60228 445 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ACTR3P61158 418 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 TAF5Q15542 800 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 OASLQ15646 514 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 GSTA3Q16772 222 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 HSF5Q4G112 596 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 DARS2Q6PI48 645 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 C1orf228Q6PIY5 440 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 NET1Q7Z628 596 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ALKBH8Q96BT7 664 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 PPP1R36Q96LQ0 422 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 C20orf27Q9GZN8 174 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 RRAGCQ9HB90 399 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 IFT122Q9HBG6 1241 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 APOBEC3GQ9HC16 384 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 SLC9A2Q9UBY0 812 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ADAMTS6Q9UKP5 1117 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 MRPL11Q9Y3B7 192 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 SCINQ9Y6U3 715 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 CLRN2A0PK11 232 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 H7C0C1 242 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 NFIBO00712 420 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 VCLP18206 1134 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ATP5OP48047 213 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 NLRP11P59045 1033 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 PPP6R3Q5H9R7 873 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ZBTB41Q5SVQ8 909 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 TDRD10Q5VZ19 366 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 CES4AQ5XG92 561 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 PAOXQ6QHF9 649 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 MYLK4Q86YV6 388 aaPredicted RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 NDUFAF2Q8N183 169 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 KCTD6Q8NC69 237 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ZNF606Q8WXB4 792 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 FAF2Q96CS3 445 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 WWP1Q9H0M0 922 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 CHCHD3Q9NX63 227 aaKnown RBP10.24□□□□□ -0.77
TRIM39-203ENST00000396547 ATXN10Q9UBB4 475 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 TJP2Q9UDY2 1190 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 CCPG1Q9ULG6 757 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 STRIP2Q9ULQ0 834 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 SNCAIPQ9Y6H5 919 aa10.24□□□□□ -0.77
TRIM39-203ENST00000396547 COL2A1P02458 1487 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-203ENST00000396547 CAPN8A6NHC0 703 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 DDNO94850 711 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-203ENST00000396547 RBP3P10745 1247 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 EPHX2P34913 555 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 ZNF252P-AS1Q0IIN9 211 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 MTMR1Q13613 665 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 PDK3Q15120 406 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 RBM44Q6ZP01 1051 aaKnown RBP10.23□□□□□ -0.77
TRIM39-203ENST00000396547 NME8Q8N427 588 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 MMADHCQ9H3L0 296 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-203ENST00000396547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRIM39-203ENST00000396547 DNAAF2Q9NVR5 837 aaKnown RBP10.23□□□□□ -0.77
TRIM39-203ENST00000396547 COL20A1Q9P218 1284 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 COQ4Q9Y3A0 265 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 PTPRJQ12913 1337 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 DNAJC6O75061 913 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 RAG1P15918 1043 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 CDKN2BP42772 138 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 RAP1GDS1P52306 607 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 COG7P83436 770 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 GCNT1Q02742 428 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 CUL2Q13617 745 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 EFHC1Q5JVL4 640 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms