RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ANKRD12Q6UB98 2062 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 TPST1O60507 370 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 PEX11AO75192 247 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 RGS20O76081 388 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 PSMG1O95456 288 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 STAMBPO95630 424 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 LMNAP02545 664 aaKnown RBP13.76□□□□□ -0.21
NFKB1-202ENST00000394820 ABL2P42684 1182 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 NEK3P51956 506 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 GTF2A2P52657 109 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 GDF10P55107 478 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 NCKAP1LP55160 1127 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 ADA2Q9NZK5 511 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 CSADQ9Y600 493 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 PROCP04070 461 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 CASP2P42575 452 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 STAT5BP51692 787 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 SLC34A1Q06495 639 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 BLMHQ13867 455 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 Q3C1V9 767 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 TFDP3Q5H9I0 405 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 TREML2Q5T2D2 321 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 RINLQ6ZS11 566 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 LRGUKQ96M69 825 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 SRPK1Q96SB4 655 aaKnown RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 CENPKQ9BS16 269 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 EBF2Q9HAK2 575 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 DNAJC16Q9Y2G8 782 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 COMMD10Q9Y6G5 202 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 ATXN2Q99700 1313 aaKnown RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 COL11A2P13942 1736 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 A6NJR5 290 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 TBX10O75333 385 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 KCNA2P16389 499 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 GLRBP48167 497 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 FNBP1LQ5T0N5 605 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 KCTD17Q8N5Z5 321 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 TRIML2Q8N7C3 387 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 B4GALNT2Q8NHY0 566 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 SEC14L1Q92503 715 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 GPRASP2Q96D09 838 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 SYNPO2Q9UMS6 1093 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 TCRBV7S3A2A0A539 114 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 USP12O75317 370 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 KRT38O76015 456 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 SUPT20HL2P0C7V6 817 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 PDK4Q16654 411 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 SUPT20HL1Q3ZLR7 823 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 GJC2Q5T442 439 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 PPIL6Q8IXY8 311 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 ICA1LQ8NDH6 482 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 ERLEC1Q96DZ1 483 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 OXNAD1Q96HP4 312 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 HIC2Q96JB3 615 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF214Q9UL59 606 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-202ENST00000394820 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
NFKB1-202ENST00000394820 BRWD3Q6RI45 1802 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 A0A1B0GVG6 124 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 PLA2G6O60733 806 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 SMNDC1O75940 238 aaKnown RBP eCLIP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 GMPRP36959 345 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 CENPCQ03188 943 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 AP1B1Q10567 949 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 BST1Q10588 318 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 C15orf59Q2T9L4 293 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 LCA5Q86VQ0 697 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 COPS5Q92905 334 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 PTPRN2Q92932 1015 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 DNAJC1Q96KC8 554 aaKnown RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 NRBP2Q9NSY0 501 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 POLIQ9UNA4 740 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 MROH7Q68CQ1 1323 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 P4HA2O15460 535 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 OATP04181 439 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 CYP1A2P05177 515 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 ATP6V1C1P21283 382 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 GSTT1P30711 240 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 TCF7P36402 384 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 VCPP55072 806 aaKnown RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 RNF43Q68DV7 783 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 NIPA1Q7RTP0 329 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 ABRAQ8N0Z2 381 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
NFKB1-202ENST00000394820 CDHR1Q96JP9 859 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 MARK4Q96L34 752 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 SENP1Q9P0U3 644 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 SLC17A6Q9P2U8 582 aa13.74□□□□□ -0.21
NFKB1-202ENST00000394820 CORO1CQ9ULV4 474 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms