RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SLC9A9Q8IVB4 645 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 SLC30A1Q9Y6M5 507 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 RECQL4O94761 1208 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 FARP2O94887 1054 aaPredicted RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 SYF2O95926 243 aaKnown RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 RARGP13631 454 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 SCUBE3Q8IX30 993 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 CNPY4Q8N129 248 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 EPS8L1Q8TE68 723 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 CFAP73A6NFT4 308 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 TRIM49D1C9J1S8 452 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 USP2O75604 605 aaPredicted RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 CDH18Q13634 790 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 SLC2A14Q8TDB8 520 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 EDEM1Q92611 657 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 CAVIN3Q969G5 261 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 NOP53Q9NZM5 478 aaKnown RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 MBL2P11226 248 aaPredicted RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 KRT4P19013 534 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 LBRQ14739 615 aaKnown RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 ARHGAP15Q53QZ3 475 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 TIGD7Q6NT04 549 aaPredicted RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 FBXO25Q8TCJ0 367 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 ZC3H15Q8WU90 426 aaKnown RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 BHMTQ93088 406 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 FGFBP2Q9BYJ0 223 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 ACP6Q9NPH0 428 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 MRPL40Q9NQ50 206 aaKnown RBP17.19■□□□□ 0.34
SCN3B-202ENST00000392770 KANSL3Q9P2N6 904 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 SLC39A10Q9ULF5 831 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 GRID1Q9ULK0 1009 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 ATP11BQ9Y2G3 1177 aa17.19■□□□□ 0.34
SCN3B-202ENST00000392770 TBKBP1A7MCY6 615 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
SCN3B-202ENST00000392770 NKX2-3Q8TAU0 364 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 BAP1Q92560 729 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 SMARCD1Q96GM5 515 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 AAR2Q9Y312 384 aaKnown RBP17.18■□□□□ 0.34
SCN3B-202ENST00000392770 ALDH2P05091 517 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 SEC24CP53992 1094 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 RPL10AP62906 217 aaKnown RBP17.18■□□□□ 0.34
SCN3B-202ENST00000392770 SYTL3Q4VX76 610 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 SCN11AQ9UI33 1791 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 MEFVO15553 781 aaPredicted RBP17.18■□□□□ 0.34
SCN3B-202ENST00000392770 IRAK1P51617 712 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 TTC23LQ6PF05 361 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 KIAA0319LQ8IZA0 1049 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
SCN3B-202ENST00000392770 TGFB1I1O43294 461 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 GJB1P08034 283 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 VCPP55072 806 aaKnown RBP17.18■□□□□ 0.34
SCN3B-202ENST00000392770 L1RE1Q9UN81 338 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 PQBP1O60828 265 aaKnown RBP17.18■□□□□ 0.34
SCN3B-202ENST00000392770 MAP2K5Q13163 448 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 PTK6Q13882 451 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 CHI3L2Q15782 390 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 PDGFCQ9NRA1 345 aa17.18■□□□□ 0.34
SCN3B-202ENST00000392770 SUPT3HB4E1H0 165 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 CAND2O75155 1236 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 SUPT3HO75486 399 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 AKT1P31749 480 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 KDSRQ06136 332 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 RFX8Q6ZV50 586 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 SLC12A8A0AV02 714 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 SDR42E2A6NKP2 422 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 KCNA2P16389 499 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 SLC6A3Q01959 620 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 ZRANB3Q5FWF4 1079 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 NUDT18Q6ZVK8 323 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 PARP9Q8IXQ6 854 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 STK25O00506 426 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 RARAP10276 462 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 CLK2P49760 499 aaKnown RBP17.17■□□□□ 0.34
SCN3B-202ENST00000392770 ARHGEF7Q14155 803 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 GJC2Q5T442 439 aaPredicted RBP17.17■□□□□ 0.34
SCN3B-202ENST00000392770 ABHD15Q6UXT9 468 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 GPR63Q9BZJ6 419 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 RPS6KL1Q9Y6S9 549 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 COL1A1P02452 1464 aaPredicted RBP17.17■□□□□ 0.34
SCN3B-202ENST00000392770 ZSCAN5CA6NGD5 496 aaPredicted RBP17.17■□□□□ 0.34
SCN3B-202ENST00000392770 AVPR1AP37288 418 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 NUMBP49757 651 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 MAPRE2Q15555 327 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 DENND1BQ6P3S1 775 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 CREG2Q8IUH2 290 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 ACTL9Q8TC94 416 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 SH3KBP1Q96B97 665 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 ENTPD7Q9NQZ7 604 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 CCNE2O96020 404 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 TRADDQ15628 312 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 ARMC2Q8NEN0 867 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 HDAC7Q8WUI4 952 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 CDT1Q9H211 546 aa17.17■□□□□ 0.34
SCN3B-202ENST00000392770 PSD3Q9NYI0 1048 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms