RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 DNAJC21Q5F1R6 531 aaKnown RBP20.99■□□□□ 0.95
PTPN11-202ENST00000392597 C6orf118Q5T5N4 469 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 SH3PXD2AQ5TCZ1 1133 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 OSTM1Q86WC4 334 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 TMEM86AQ8N2M4 240 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 ZCCHC9Q8N567 271 aaKnown RBP20.99■□□□□ 0.95
PTPN11-202ENST00000392597 SLC2A14Q8TDB8 520 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 TLCD1Q96CP7 247 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 LPIN3Q9BQK8 851 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 ROPN1BQ9BZX4 212 aaPredicted RBP20.99■□□□□ 0.95
PTPN11-202ENST00000392597 ROPN1Q9HAT0 212 aaPredicted RBP20.99■□□□□ 0.95
PTPN11-202ENST00000392597 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.99■□□□□ 0.95
PTPN11-202ENST00000392597 ZNF487B1APH4 448 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 CABYRO75952 493 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 RPL9P32969 192 aaKnown RBP20.98■□□□□ 0.95
PTPN11-202ENST00000392597 MLH1P40692 756 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 SLC8A3P57103 927 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 TFDP2Q14188 446 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 TAF5Q15542 800 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 RFX6Q8HWS3 928 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 HAUS1Q96CS2 278 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 CFAP57Q96MR6 1250 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 GAD1Q99259 594 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 ADAM7Q9H2U9 754 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 HMX1Q9NP08 348 aaPredicted RBP20.98■□□□□ 0.95
PTPN11-202ENST00000392597 GRIN2DO15399 1336 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 MDM4O15151 490 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 TTC4O95801 387 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 THPOP40225 353 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 CDH6P55285 790 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 PTK7Q13308 1070 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 MORF4L2Q15014 288 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 FAM172AQ8WUF8 416 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 CENPIQ92674 756 aaPredicted RBP20.98■□□□□ 0.95
PTPN11-202ENST00000392597 C11orf84Q9BUA3 381 aaPredicted RBP20.98■□□□□ 0.95
PTPN11-202ENST00000392597 CALN1Q9BXU9 219 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 MAK16Q9BXY0 300 aaKnown RBP20.98■□□□□ 0.95
PTPN11-202ENST00000392597 B3GNT5Q9BYG0 378 aa20.98■□□□□ 0.95
PTPN11-202ENST00000392597 AGO3Q9H9G7 860 aaKnown RBP20.98■□□□□ 0.95
PTPN11-202ENST00000392597 ARL5CA6NH57 179 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 MEIS3P2A8K0S8 358 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 SGK1O00141 431 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 EIF3HO15372 352 aaKnown RBP eCLIP20.97■□□□□ 0.95
PTPN11-202ENST00000392597 PTPN1P18031 435 aaKnown RBP20.97■□□□□ 0.95
PTPN11-202ENST00000392597 DYNLT1P63172 113 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 GNGT1P63211 74 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 DPYSL3Q14195 570 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 CDO1Q16878 200 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 AGMOQ6ZNB7 445 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 SENP8Q96LD8 212 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 TMEM121Q9BTD3 319 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 DUSP16Q9BY84 665 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 STMN4Q9H169 189 aaPredicted RBP20.97■□□□□ 0.95
PTPN11-202ENST00000392597 NGRNQ9NPE2 291 aaKnown RBP20.97■□□□□ 0.95
PTPN11-202ENST00000392597 BCCIPQ9P287 314 aaKnown RBP eCLIP20.97■□□□□ 0.95
PTPN11-202ENST00000392597 TPX2Q9ULW0 747 aaKnown RBP20.97■□□□□ 0.95
PTPN11-202ENST00000392597 PADI3Q9ULW8 664 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 NOVA2Q9UNW9 492 aaKnown RBP20.97■□□□□ 0.95
PTPN11-202ENST00000392597 SHOC2Q9UQ13 582 aa20.97■□□□□ 0.95
PTPN11-202ENST00000392597 CAND2O75155 1236 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 LHX1P48742 406 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 ATP1A2P50993 1020 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 ATP11AP98196 1134 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 GPS1Q13098 491 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 ZSCAN26Q16670 478 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 FAM26DQ5JW98 314 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 WSCD1Q658N2 575 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 FUKQ8N0W3 1084 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 GLIS1Q8NBF1 620 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 MCF2LO15068 1137 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 IVLP07476 585 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 TKTP29401 623 aaKnown RBP20.96■□□□□ 0.95
PTPN11-202ENST00000392597 RDXP35241 583 aaKnown RBP20.96■□□□□ 0.95
PTPN11-202ENST00000392597 PPP2R2AP63151 447 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 DSC3Q14574 896 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 EFHC1Q5JVL4 640 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 MFSD5Q6N075 450 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 LRRC31Q6UY01 552 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 PCGF5Q86SE9 256 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 RNF157Q96PX1 679 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 DDX23Q9BUQ8 820 aaKnown RBP20.96■□□□□ 0.95
PTPN11-202ENST00000392597 SQORQ9Y6N5 450 aa20.96■□□□□ 0.95
PTPN11-202ENST00000392597 SRRM3A6NNA2 597 aaPredicted RBP20.95■□□□□ 0.94
PTPN11-202ENST00000392597 RASGRF2O14827 1237 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 AGTP01019 485 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 NPR3P17342 541 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 CD52P31358 61 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 HDAC4P56524 1084 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 KRT81Q14533 505 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 RNF180Q86T96 592 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 SPATA18Q8TC71 538 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 KCTD13Q8WZ19 329 aa20.95■□□□□ 0.94
PTPN11-202ENST00000392597 DDX20Q9UHI6 824 aaKnown RBP20.95■□□□□ 0.94
PTPN11-202ENST00000392597 RGS16O15492 202 aaPredicted RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 TCEA3O75764 348 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 ZSCAN5DPP0CG00 497 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 SKIP12755 728 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 LCP1P13796 627 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 PAX3P23760 479 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 HPDP32754 393 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms