RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ASNSD1Q9NWL6 643 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 LCMT1Q9UIC8 334 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
SPTBN1-203ENST00000389980 ESYT3A0FGR9 886 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 ARHGEF37A1IGU5 675 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 LRRD1A4D1F6 860 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 HHLA1C9JL84 531 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 CCDC188H7C350 402 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 KIAA0355O15063 1070 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 CYP2F1P24903 491 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 SDC4P31431 198 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 RFC2P35250 354 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 ATXN1P54253 815 aaKnown RBP12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 TRADDQ15628 312 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 KAZNQ674X7 775 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 CCDC70Q6NSX1 233 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 FUT10Q6P4F1 479 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 STKLD1Q8NE28 680 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 EXD1Q8NHP7 514 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM172AQ8WUF8 416 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 KCTD13Q8WZ19 329 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 SLITRK1Q96PX8 696 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 FAM118BQ9BPY3 351 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 RAB21Q9UL25 225 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 USP18Q9UMW8 372 aa12.77□□□□□ -0.36
SPTBN1-203ENST00000389980 ALPK3Q96L96 1907 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 FSCN2O14926 492 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 HEXIM1O94992 359 aaKnown RBP12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 TRUB2O95900 331 aaKnown RBP12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 CD48P09326 243 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 USP17L7P0C7H9 530 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 MYBL2P10244 700 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 ARPP19P56211 112 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 MRPS5P82675 430 aaKnown RBP12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 RTP2Q5QGT7 225 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 LRRC38Q5VT99 294 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 MFSD5Q6N075 450 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 SCYL2Q6P3W7 929 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 OTOP2Q7RTS6 562 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 SPATA2LQ8IUW3 424 aaPredicted RBP12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 DEFB106AQ8N104 65 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 C1orf54Q8WWF1 131 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 ATG4AQ8WYN0 398 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 HSPH1Q92598 858 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 TOP1MTQ969P6 601 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 CWH43Q9H720 699 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 CSNK1G1Q9HCP0 422 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 STIM2Q9P246 746 aa12.77□□□□□ -0.37
SPTBN1-203ENST00000389980 GOLGA6L10A0A0M3HER8 536 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 ABHD14A-ACY1A0A1B0GW23 586 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 TARSL2A2RTX5 802 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 SYN3O14994 580 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 TTI1O43156 1089 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 PITX1P78337 314 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 GUCY2DQ02846 1103 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 IFRD2Q12894 506 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 HADHQ16836 314 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 TTC27Q6P3X3 843 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 RSPO2Q6UXX9 243 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 RCOR2Q8IZ40 523 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 ZCWPW1Q9H0M4 648 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 R3HDM2Q9Y2K5 976 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 SF3B1O75533 1304 aaKnown RBP eCLIP12.76□□□□□ -0.372e-7■■■■■ 73.6
SPTBN1-203ENST00000389980 PTPRSQ13332 1948 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 RANBP2P49792 3224 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 CCDC151A5D8V7 595 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 YJEFN3A6XGL0 299 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 E7ENQ6 273 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 DPYSL4O14531 572 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 FGFR3P22607 806 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 GRIK1P39086 918 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 KCNJ1P48048 391 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 ALDH7A1P49419 539 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 HDAC4P56524 1084 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 SNX1Q13596 522 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 BRD3Q15059 726 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 DCAF6Q58WW2 860 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 RAB41Q5JT25 222 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 SDHAF4Q5VUM1 108 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 SYPL2Q5VXT5 272 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 WDR93Q6P2C0 686 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 PRSS55Q6UWB4 352 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 SPOCD1Q6ZMY3 1216 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 TTC9BQ8N6N2 239 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 SCAMP5Q8TAC9 235 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 TBCBQ99426 244 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 MAGEB5Q9BZ81 275 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 EPB41L5Q9HCM4 733 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 DMAP1Q9NPF5 467 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms