RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 INVSQ9Y283 1065 aa8.28□□□□□ -1.08
FAM49A-201ENST00000381323 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.28□□□□□ -1.08
FAM49A-201ENST00000381323 WASP42768 502 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 GALK1P51570 392 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 EPHA5P54756 1037 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 STX17P56962 302 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 SATB1Q01826 763 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 PKP1Q13835 747 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 DDX1Q92499 740 aaKnown RBP8.27□□□□□ -1.08
FAM49A-201ENST00000381323 SNX19Q92543 992 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 C8orf48Q96LL4 319 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 TPSD1Q9BZJ3 242 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 TMEM8AQ9HCN3 771 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 TMLHEQ9NVH6 421 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.08
FAM49A-201ENST00000381323 NEDD8-MDP1E9PL57 170 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 CST3P01034 146 aaPredicted RBP8.27□□□□□ -1.09
FAM49A-201ENST00000381323 NNMTP40261 264 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 SLC5A3P53794 718 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 CCDC173Q0VFZ6 552 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 DMC1Q14565 340 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 ARMCX6Q7L4S7 300 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 FILIP1Q7Z7B0 1213 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 SMYD4Q8IYR2 804 aaPredicted RBP8.27□□□□□ -1.09
FAM49A-201ENST00000381323 TXLNBQ8N3L3 684 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 ERLEC1Q96DZ1 483 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 DDX50Q9BQ39 737 aaKnown RBP8.27□□□□□ -1.09
FAM49A-201ENST00000381323 GMIPQ9P107 970 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 PCDHB9Q9Y5E1 797 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 SLC12A8A0AV02 714 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 LRRIQ3A6PVS8 624 aaPredicted RBP8.27□□□□□ -1.09
FAM49A-201ENST00000381323 SOBPA7XYQ1 873 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 FAM163BP0C2L3 166 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 TBXAS1P24557 533 aaPredicted RBP8.27□□□□□ -1.09
FAM49A-201ENST00000381323 GJA4P35212 333 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 CHKAP35790 457 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 SPOPLQ6IQ16 392 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 GSDMAQ96QA5 445 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 SIX4Q9UIU6 781 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 PLA2G4CQ9UP65 541 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 C2orf78A6NCI8 922 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 PLA2G4AP47712 749 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 PSEN1P49768 467 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 Q6ZS52 159 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 ADAT2Q7Z6V5 191 aaKnown RBP8.27□□□□□ -1.09
FAM49A-201ENST00000381323 FAM114A1Q8IWE2 563 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 MSANTD4Q8NCY6 345 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 CEP295NLQ96MC4 621 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 FIZ1Q96SL8 496 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 TRPV5Q9NQA5 729 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 WDR70Q9NW82 654 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 ARHGAP26Q9UNA1 814 aa8.27□□□□□ -1.09
FAM49A-201ENST00000381323 FRMD3A2A2Y4 597 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 MEI4A8MW99 385 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 TGFB1I1O43294 461 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 HCRTO43612 131 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 MOCS3O95396 460 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 RETP07949 1114 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 SFSWAPQ12872 951 aaKnown RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 E2F4Q16254 413 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 RNF43Q68DV7 783 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 LPCAT2Q7L5N7 544 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 TRMT2BQ96GJ1 504 aaKnown RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 NUSAP1Q9BXS6 441 aaKnown RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 MIR1-1HGQ9H1L0 117 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 TRPV4Q9HBA0 871 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 RAB20Q9NX57 234 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 NUDT5Q9UKK9 219 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 PRUNE2Q8WUY3 3088 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 CNOT1A5YKK6 2376 aaKnown RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 KLF8O95600 359 aaPredicted RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 GNA14O95837 355 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 F11P03951 625 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 RARGP13631 454 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 PFKLP17858 780 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 FCHO2Q0JRZ9 810 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 ZNF528Q3MIS6 628 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 OTUB2Q96DC9 234 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 SPATA17Q96L03 361 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 GTPBP2Q9BX10 602 aaKnown RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 DPEP3Q9H4B8 488 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 CRTAC1Q9NQ79 661 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 CTNND2Q9UQB3 1225 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 CACNA1IQ9P0X4 2223 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 KHNYNO15037 678 aaKnown RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 KAT7O95251 611 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 CCDC157Q569K6 752 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 SYCP2LQ5T4T6 812 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 TMEM270Q6UE05 265 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 TMC8Q8IU68 726 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 CAMKK1Q8N5S9 505 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 IPO4Q8TEX9 1081 aaKnown RBP8.26□□□□□ -1.09
FAM49A-201ENST00000381323 ARRDC1-AS1Q9H2J1 176 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 TSPY26PQ9H489 355 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 CCL26Q9Y258 94 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 NOL4O94818 638 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 LCP1P13796 627 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 GNSP15586 552 aa8.26□□□□□ -1.09
FAM49A-201ENST00000381323 LRRC63Q05C16 580 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms