RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 NLRC4Q9NPP4 1024 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 RIC8AQ9NPQ8 531 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 PANK4Q9NVE7 773 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 PSD3Q9NYI0 1048 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 DDX25Q9UHL0 483 aaKnown RBP4.05□□□□□ -1.76
SMC6-202ENST00000381272 LCMT1Q9UIC8 334 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 CDC42EP3Q9UKI2 254 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 HPCAL4Q9UM19 191 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 SNX12Q9UMY4 172 aa4.05□□□□□ -1.76
SMC6-202ENST00000381272 ADAMTSL1Q8N6G6 1762 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 LY75O60449 1722 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 NHSQ6T4R5 1651 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 GAKO14976 1311 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 IGKV6D-41A0A0C4DH26 115 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 A0A0G2JNJ9 132 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 TARSL2A2RTX5 802 aaKnown RBP4.04□□□□□ -1.76
SMC6-202ENST00000381272 RFPL3O75679 317 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 FGFR1OPO95684 399 aaKnown RBP4.04□□□□□ -1.76
SMC6-202ENST00000381272 TTLL1O95922 423 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 TUBBP07437 444 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 GYS1P13807 737 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 HNRNPH3P31942 346 aaKnown RBP4.04□□□□□ -1.76
SMC6-202ENST00000381272 ACTN2P35609 894 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 SLC1A4P43007 532 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 DNA2P51530 1060 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 CDK17Q00537 523 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 ZNF543Q08ER8 600 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 COASYQ13057 564 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 MOGSQ13724 837 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 TCEA2Q15560 299 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 ASPRV1Q53RT3 343 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 PIK3R6Q5UE93 754 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 GRAMD4Q6IC98 578 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 PDXDC1Q6P996 788 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 USP17L6PQ6QN14 398 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 LRRC55Q6ZSA7 311 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 ZFPM1Q8IX07 1006 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 MYOCDQ8IZQ8 938 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 GUF1Q8N442 669 aaKnown RBP4.04□□□□□ -1.76
SMC6-202ENST00000381272 CERS5Q8N5B7 392 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 MSL3Q8N5Y2 521 aaKnown RBP4.04□□□□□ -1.76
SMC6-202ENST00000381272 GOLGA5Q8TBA6 731 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 E2F7Q96AV8 911 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 DNAJC19Q96DA6 116 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 GNRHR2Q96P88 292 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 OSBPL9Q96SU4 736 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 CDK5RAP1Q96SZ6 601 aaKnown RBP4.04□□□□□ -1.76
SMC6-202ENST00000381272 TSG101Q99816 390 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 CRACR2AQ9BSW2 395 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 SELENOOQ9BVL4 669 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 LSM14BQ9BX40 385 aaKnown RBP4.04□□□□□ -1.76
SMC6-202ENST00000381272 RAB34Q9BZG1 259 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 TSGA10Q9BZW7 698 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 ZHX3Q9H4I2 956 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 FAM204AQ9H8W3 233 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 CD248Q9HCU0 757 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 POLD4Q9HCU8 107 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 ACSS2Q9NR19 701 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 Q9UFV3 132 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 PCDHA12Q9UN75 941 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 JRKLQ9Y4A0 524 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 PCDHAC2Q9Y5I4 1007 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 COL4A3BPQ9Y5P4 624 aa4.04□□□□□ -1.76
SMC6-202ENST00000381272 A0A0U1RQG5 324 aaPredicted RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 ANO9A1A5B4 782 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 C1QTNF3-AMACRE9PGA6 284 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 AGPSO00116 658 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TULP2O00295 520 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TLR2O60603 784 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 ZNF623O75123 536 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 MED24O75448 989 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 BBOX1O75936 387 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 NOL4O94818 638 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 PRPF6O94906 941 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 LCA5LO95447 670 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 KRT18P05783 430 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 PLA2G4BP0C869 781 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 JMJD7P0C870 316 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 SNHG28P0DPA3 235 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 MCM3P25205 808 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 APEX1P27695 318 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 SHMT1P34896 483 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 FNTBP49356 437 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 AARSP49588 968 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMC6-202ENST00000381272 MEOX1P50221 254 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 MRPL12P52815 198 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 CACNB3P54284 484 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 RNASE9P60153 205 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 POLR2FP61218 127 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 LRRC63Q05C16 580 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 GABPAQ06546 454 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 DDR1Q08345 913 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TCP10Q12799 353 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 PABPC4Q13310 644 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMC6-202ENST00000381272 ORC2Q13416 577 aaPredicted RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 PUM1Q14671 1186 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMC6-202ENST00000381272 RNF151Q2KHN1 245 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 CRY2Q49AN0 593 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 MAP9Q49MG5 647 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TDRD12Q587J7 1177 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms