RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CFAP57Q96MR6 1250 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 LPIN3Q9BQK8 851 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 PHACTR1Q9C0D0 580 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 TSPYL2Q9H2G4 693 aaPredicted RBP20.13■□□□□ 0.81
GMDS-201ENST00000380805 PRDM4Q9UKN5 801 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 NOVA2Q9UNW9 492 aaKnown RBP20.13■□□□□ 0.81
GMDS-201ENST00000380805 SHOC2Q9UQ13 582 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 PTCH2Q9Y6C5 1203 aa20.13■□□□□ 0.81
GMDS-201ENST00000380805 IVLP07476 585 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 PDGFRBP09619 1106 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 DESP17661 470 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 PPP2R2AP63151 447 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 TFDP2Q14188 446 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 DPYSL3Q14195 570 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 FAM47CQ5HY64 1035 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 CCDC25Q86WR0 208 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 RAET1EQ8TD07 263 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 SLC2A14Q8TDB8 520 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 HSPH1Q92598 858 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 CENPHQ9H3R5 247 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.12■□□□□ 0.81
GMDS-201ENST00000380805 TPX2Q9ULW0 747 aaKnown RBP20.12■□□□□ 0.81
GMDS-201ENST00000380805 BRCA2P51587 3418 aa20.12■□□□□ 0.81
GMDS-201ENST00000380805 MEIS3P2A8K0S8 358 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 AGTP01019 485 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 TKTP29401 623 aaKnown RBP20.11■□□□□ 0.81
GMDS-201ENST00000380805 ATP1A2P50993 1020 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 RAB27AP51159 221 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 RNASEH2BQ5TBB1 312 aaKnown RBP20.11■□□□□ 0.81
GMDS-201ENST00000380805 FUKQ8N0W3 1084 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 TMEM86AQ8N2M4 240 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 FAM172AQ8WUF8 416 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 HAUS1Q96CS2 278 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 FAF2Q96CS3 445 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 TMEM121Q9BTD3 319 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 B3GNT5Q9BYG0 378 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 NINJ2Q9NZG7 142 aa20.11■□□□□ 0.81
GMDS-201ENST00000380805 CYB561D2O14569 222 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 GRAP2O75791 330 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 THP07101 528 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 ABHD2P08910 425 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 ADORA2BP29275 332 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 CCND3P30281 292 aaPredicted RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 MLH1P40692 756 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 CDH6P55285 790 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 HDAC4P56524 1084 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 MAGOHP61326 146 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 DSC3Q14574 896 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 NOMO1Q15155 1222 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 KCNA10Q16322 511 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 RAB6CQ53S08 254 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 FAM26DQ5JW98 314 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 MAP3K21Q5TCX8 1036 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 AGMOQ6ZNB7 445 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 PRUNE1Q86TP1 453 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 RFX6Q8HWS3 928 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 MAP7D3Q8IWC1 876 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 KCTD13Q8WZ19 329 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 RNF157Q96PX1 679 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 DDX23Q9BUQ8 820 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 DUSP16Q9BY84 665 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 RAB6CQ9H0N0 254 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 STMN4Q9H169 189 aaPredicted RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 AGO3Q9H9G7 860 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 FARP1Q9Y4F1 1045 aaPredicted RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 TDRD15B5MCY1 1934 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 DCDC2CA8MYV0 355 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 CTSHP09668 335 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 ZSCAN5DPP0CG00 497 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 PRKAR2AP13861 404 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 IL4RP24394 825 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 RPL9P32969 192 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 PRMT2P55345 433 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 GPS1Q13098 491 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 CTU1Q7Z7A3 348 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 PCGF5Q86SE9 256 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 PCSK9Q8NBP7 692 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 SERPINB12Q96P63 405 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 GAD1Q99259 594 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 ZNF670Q9BS34 389 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 CALN1Q9BXU9 219 aa20.1■□□□□ 0.81
GMDS-201ENST00000380805 CNOT10Q9H9A5 744 aaKnown RBP20.1■□□□□ 0.81
GMDS-201ENST00000380805 COL4A4P53420 1690 aaPredicted RBP20.09■□□□□ 0.81
GMDS-201ENST00000380805 SGK1O00141 431 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 SMAPO00193 183 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 RASGRF2O14827 1237 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 PECAM1P16284 738 aaPredicted RBP20.09■□□□□ 0.81
GMDS-201ENST00000380805 PTPN1P18031 435 aaKnown RBP20.09■□□□□ 0.81
GMDS-201ENST00000380805 LSP1P33241 339 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 DYNLT1P63172 113 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 PLCB3Q01970 1234 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 PTK7Q13308 1070 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 AUHQ13825 339 aaKnown RBP20.09■□□□□ 0.81
GMDS-201ENST00000380805 PTGISQ16647 500 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 CDO1Q16878 200 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 SLC9A4Q6AI14 798 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 PAQR9Q6ZVX9 377 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 SPATA18Q8TC71 538 aa20.09■□□□□ 0.81
GMDS-201ENST00000380805 SNRNP25Q9BV90 132 aaKnown RBP20.09■□□□□ 0.81
GMDS-201ENST00000380805 NGRNQ9NPE2 291 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms