RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 CCNA1P78396 465 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 CYP1B1Q16678 543 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 ZNF618Q5T7W0 954 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 ZCCHC9Q8N567 271 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 ZNF317Q96PQ6 595 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 PRM3Q9NNZ6 103 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 BRWD3Q6RI45 1802 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 APOL1O14791 398 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 UGT1A9O60656 530 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 TGFB3P10600 412 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 GMPRP36959 345 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 GRIA1P42261 906 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 MAP3K10Q02779 954 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 KDSRQ06136 332 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 GRIK4Q16099 956 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 UNC5BQ8IZJ1 945 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 CPT1BQ92523 772 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 CCT6BQ92526 530 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 UGT1A7Q9HAW7 530 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 UGT1A10Q9HAW8 530 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 UGT1A8Q9HAW9 530 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 PPARGC1AQ9UBK2 798 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 ZFP69BQ9UJL9 534 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 CSPG5O95196 566 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 GEMIN4P57678 1058 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 RTP1P59025 263 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 C16orf46Q6P387 395 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 XYLT1Q86Y38 959 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 PAF1Q8N7H5 531 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 MICAL1Q8TDZ2 1067 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 TXLNGYQ9BZA5 131 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 VPS11Q9H270 941 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 MFHAS1Q9Y4C4 1052 aa11.41□□□□□ -0.58
DNMT3A-203ENST00000380746 KRT16P08779 473 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 SRGAP2BP0DMP2 458 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 LMO2P25791 158 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 EPHX2P34913 555 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 GBE1Q04446 702 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 OLIG2Q13516 323 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 RWDD4Q6NW29 188 aaKnown RBP11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 SYDE1Q6ZW31 735 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 SLC2A14Q8TDB8 520 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 EDEM1Q92611 657 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 CYTH2Q99418 400 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 MYLK2Q9H1R3 596 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 SIGLEC16A6NMB1 481 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 FSBPO95073 299 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 BAG2O95816 211 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 MOCS2O96007 188 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 PCK1P35558 622 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 SLC8A3P57103 927 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 MBTD1Q05BQ5 628 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 TFDP2Q14188 446 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 DPYSL3Q14195 570 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 ACCSLQ4AC99 568 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 PID1Q7Z2X4 250 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 IGDCC3Q8IVU1 814 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 CKAP2Q8WWK9 683 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 ZFP42Q96MM3 310 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 LGMNQ99538 433 aa11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 FBXO6Q9NRD1 293 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 FNDC3AQ9Y2H6 1198 aaKnown RBP11.4□□□□□ -0.58
DNMT3A-203ENST00000380746 MYH9P35579 1960 aaKnown RBP11.4□□□□□ -0.59
DNMT3A-203ENST00000380746 CYB561D2O14569 222 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 SKAP2O75563 359 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 RECQL4O94761 1208 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 SLC25A27O95847 323 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 GNL1P36915 607 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 ARL4AP40617 200 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 AP3M2P53677 418 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 COPS2P61201 443 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 MCL1Q07820 350 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 TAF1BQ53T94 588 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 HEATR6Q6AI08 1181 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 SIX6OS1Q8N1H7 587 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 CCHCR1Q8TD31 782 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 VCPIP1Q96JH7 1222 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 XYLT2Q9H1B5 865 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 ASB14A6NK59 587 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 PDHA1P08559 390 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 CALRP27797 417 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 ABCD1P33897 745 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 ELF3P78545 371 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 KLF1Q13351 362 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 SNAPC2Q13487 334 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 MORF4L2Q15014 288 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 FASTKD5Q7L8L6 764 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 NDUFAF2Q8N183 169 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 TTC13Q8NBP0 860 aa11.39□□□□□ -0.59
DNMT3A-203ENST00000380746 PGBD4Q96DM1 585 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms