RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SPASTQ9UBP0 616 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 V9GYQ6 96 aa16.59■□□□□ 0.25
COL2A1-202ENST00000380518 TPST1O60507 370 aa16.58■□□□□ 0.25
COL2A1-202ENST00000380518 RGS2P41220 211 aa16.58■□□□□ 0.25
COL2A1-202ENST00000380518 PMS1P54277 932 aaKnown RBP16.58■□□□□ 0.25
COL2A1-202ENST00000380518 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.25
COL2A1-202ENST00000380518 KPNB1Q14974 876 aaKnown RBP16.58■□□□□ 0.25
COL2A1-202ENST00000380518 TRIM60Q495X7 471 aa16.58■□□□□ 0.25
COL2A1-202ENST00000380518 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.25
COL2A1-202ENST00000380518 CHST12Q9NRB3 414 aa16.58■□□□□ 0.25
COL2A1-202ENST00000380518 GIMAP4Q9NUV9 329 aa16.58■□□□□ 0.25
COL2A1-202ENST00000380518 GPATCH2LQ9NWQ4 482 aa16.58■□□□□ 0.25
COL2A1-202ENST00000380518 SLCO1B7G3V0H7 640 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 GPR182O15218 404 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 MAPTP10636 758 aaKnown RBP16.58■□□□□ 0.24
COL2A1-202ENST00000380518 SCTRP47872 440 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 MYL6P60660 151 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 DSG1Q02413 1049 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 FAM117BQ6P1L5 589 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 ACTL9Q8TC94 416 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 TMEM176AQ96HP8 235 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 VPS50Q96JG6 964 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 RUVBL2Q9Y230 463 aaKnown RBP16.58■□□□□ 0.24
COL2A1-202ENST00000380518 DRG1Q9Y295 367 aaKnown RBP16.58■□□□□ 0.24
COL2A1-202ENST00000380518 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 MAGEA13PA6NCF6 341 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 CYB561D2O14569 222 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 GLI1P08151 1106 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 DEFA1P59665 94 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 DEFA3P59666 94 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 HPCAP84074 193 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 SEL1L3Q68CR1 1132 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 TRIM69Q86WT6 500 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 HOMEZQ8IX15 550 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 ABRAQ8N0Z2 381 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 APBB2Q92870 758 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 HES6Q96HZ4 224 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 ZNF333Q96JL9 665 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
COL2A1-202ENST00000380518 MROH8Q9H579 483 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 RNF112Q9ULX5 631 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 F5H5T6 163 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 SOAT1P35610 550 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 FAM131BQ86XD5 332 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 RXFP2Q8WXD0 754 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 ZFYVE19Q96K21 471 aa16.58■□□□□ 0.24
COL2A1-202ENST00000380518 CALB2P22676 271 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 HUNKP57058 714 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 ADGRF2Q8IZF7 708 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 PCDH9Q9HC56 1237 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 ACOT9Q9Y305 439 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 TM9SF1O15321 606 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 MIB1Q86YT6 1006 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 SCUBE1Q8IWY4 988 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 AGO4Q9HCK5 861 aaKnown RBP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 SHOC2Q9UQ13 582 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 PCDHB7Q9Y5E2 793 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 KANSL1LA0AUZ9 987 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 AQP5P55064 265 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 MRPL28Q13084 256 aaKnown RBP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 POLD3Q15054 466 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 SYTL5Q8TDW5 730 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 PXMP2Q9NR77 195 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 NMRK1Q9NWW6 199 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 DNAJC16Q9Y2G8 782 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 KRT87PA6NCN2 255 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 RBP1P09455 135 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 SERPINB5P36952 375 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 AVPR1AP37288 418 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 BTKQ06187 659 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 CCDC15Q0P6D6 951 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 BNC2Q6ZN30 1099 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 RNF180Q86T96 592 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 SEPT8Q92599 483 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 DCLRE1BQ9H816 532 aa16.57■□□□□ 0.24
COL2A1-202ENST00000380518 IARS2Q9NSE4 1012 aaKnown RBP16.57■□□□□ 0.24
COL2A1-202ENST00000380518 ATP6V1B1P15313 513 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 TFE3P19532 575 aaPredicted RBP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 CSTF3Q12996 717 aaKnown RBP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 STRA8Q7Z7C7 330 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 FAM9CQ8IZT9 166 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 EMC1Q8N766 993 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 MPP6Q9NZW5 540 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 USP1O94782 785 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 MZF1P28698 734 aaPredicted RBP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 THPOP40225 353 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 ALDH7A1P49419 539 aaKnown RBP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 ERO1BQ86YB8 467 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 FBXO32Q969P5 355 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 NCKIPSDQ9NZQ3 722 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 E7ENQ6 273 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 PIK3CDO00329 1044 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 NFIBO00712 420 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 UBE3AQ05086 875 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 MPP3Q13368 585 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms