RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 THEM5Q8N1Q8 247 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ACTL9Q8TC94 416 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 JADE3Q92613 823 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 AGBL1Q96MI9 1066 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 PWWP2AQ96N64 755 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CATSPER2Q96P56 530 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TCF7L2Q9NQB0 619 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 PACSIN3Q9UKS6 424 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 LZTS3O60299 673 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CAMTA2O94983 1202 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 STAT5BP51692 787 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SNRPFP62306 86 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CDK16Q00536 496 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 LAMC2Q13753 1193 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 EFCAB12Q6NXP0 572 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 DENND1BQ6P3S1 775 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 DENND5BQ6ZUT9 1274 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 PABPC5Q96DU9 382 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 MASTLQ96GX5 879 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ZFRQ96KR1 1074 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 THUMPD3Q9BV44 507 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 FAM192AQ9GZU8 254 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 FAM8A1Q9UBU6 413 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 USP20Q9Y2K6 914 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CDH23Q9H251 3354 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TMEM150BA6NC51 233 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SYNDIG1LA6NDD5 238 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 AGRPO00253 132 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 MT-CO1P00395 513 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 PTPN7P35236 360 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SREBF1P36956 1147 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 GRIK1P39086 918 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 PBX1P40424 430 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CLEC16AQ2KHT3 1053 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 KCTD21Q4G0X4 260 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 RBM44Q6ZP01 1051 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 OTOAQ7RTW8 1153 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 HEATR4Q86WZ0 1026 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 P3H2Q8IVL5 708 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SCUBE3Q8IX30 993 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 PIWIL2Q8TC59 973 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 BAP1Q92560 729 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 EPAS1Q99814 870 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 MTG1Q9BT17 334 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SEMA6AQ9H2E6 1030 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF556Q9HAH1 456 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TRPC7Q9HCX4 862 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CAB39Q9Y376 341 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 N4BP2Q86UW6 1770 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 RPS6KA4O75676 772 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF189O75820 626 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ARP10275 920 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 FGFR2P21802 821 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 HMOX2P30519 316 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SERPINB8P50452 374 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 MAP3K10Q02779 954 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ITGADQ13349 1161 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 PTK2BQ14289 1009 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 RRP1BQ14684 758 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 Q4G0T1 1027 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 DUPD1Q68J44 220 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CATSPER4Q7RTX7 472 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TXNRD3Q86VQ6 643 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CCDC60Q8IWA6 550 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TBC1D16Q8TBP0 767 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF606Q8WXB4 792 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF669Q96BR6 464 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 REXO4Q9GZR2 422 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SP110Q9HB58 689 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SLC5A4Q9NY91 659 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 AHCYL1O43865 530 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ZMPSTE24O75844 475 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 FAM200BP0CF97 657 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 FASP25445 335 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CDH8P55286 799 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 NUP107P57740 925 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 GALNTL6Q49A17 601 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 AGAP9Q5VTM2 703 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TMC5Q6UXY8 1006 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 LRRC8DQ7L1W4 858 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 USP33Q8TEY7 942 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SGF29Q96ES7 293 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SEPHS2Q99611 448 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CNGB3Q9NQW8 809 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CSDE1O75534 798 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CALCAP01258 141 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CNTFP26441 200 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SOX6P35712 828 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 DRG2P55039 364 aaKnown RBP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 CDC42EP5Q6NZY7 148 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TAF2Q6P1X5 1199 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TNS4Q8IZW8 715 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TNIP3Q96KP6 325 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 ZBED2Q9BTP6 218 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 SCN3BQ9NY72 215 aa4.33□□□□□ -1.72
BRCA2-201ENST00000380152 TMA7Q9Y2S6 64 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms