RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 RNF40O75150 1001 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 FAM200BP0CF97 657 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 PMS1P54277 932 aaKnown RBP25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 COBLL1Q53SF7 1204 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 FILIP1Q7Z7B0 1213 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 CD101Q93033 1021 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 JAKMIP2Q96AA8 810 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 TIGD1Q96MW7 591 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 NT5C1AQ9BXI3 368 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 CSNK1G1Q9HCP0 422 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 IL37Q9NZH6 218 aa25.21■■□□□ 1.63
CDKN2A-203ENST00000380151 TRIM49BA6NDI0 452 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 COCHO43405 550 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 CILPO75339 1184 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 TRIM21P19474 475 aaKnown RBP25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 DRD1P21728 446 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 NR1H3Q13133 447 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 LPAL2Q16609 132 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 DCAF17Q5H9S7 520 aaPredicted RBP25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 ANKRD40Q6AI12 368 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 WHAMMQ8TF30 809 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 CCSER2Q9H7U1 834 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 HOOK1Q9UJC3 728 aaKnown RBP25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 ZNF292O60281 2723 aa25.2■■□□□ 1.62
CDKN2A-203ENST00000380151 SLC16A3O15427 465 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 STX10O60499 249 aa25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 MCCD1P59942 119 aaPredicted RBP25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 SRSF5Q13243 272 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 HECTD3Q5T447 861 aa25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 TCERG1LQ5VWI1 586 aa25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 GPRIN1Q7Z2K8 1008 aa25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 ZC3H3Q8IXZ2 948 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 FBXL13Q8NEE6 735 aa25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 EZH1Q92800 747 aaPredicted RBP25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 EXOC4Q96A65 974 aa25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 HNRNPABQ99729 332 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-203ENST00000380151 FAM92AA1XBS5 289 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 CYP17A1P05093 508 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 ZDHHC11BP0C7U3 371 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 PGFP49763 221 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 FKBP3Q00688 224 aaKnown RBP25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 ZNF394Q53GI3 561 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 ISM2Q6H9L7 571 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 PRR23BQ6ZRT6 265 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 CLEC20AQ6ZU45 233 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 LONP2Q86WA8 852 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 DDX42Q86XP3 938 aaKnown RBP eCLIP25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 CYFIP2Q96F07 1278 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 ZFRQ96KR1 1074 aaKnown RBP25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 ARID3AQ99856 593 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 POLR3BQ9NW08 1133 aaPredicted RBP25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 COMMD8Q9NX08 183 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 RAB20Q9NX57 234 aa25.18■■□□□ 1.62
CDKN2A-203ENST00000380151 MYH10P35580 1976 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 TUBP50607 506 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 GAB4Q2WGN9 574 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 CBWD6Q4V339 395 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 CBWD3Q5JTY5 395 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 CBWD5Q5RIA9 395 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 SNX30Q5VWJ9 437 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 FBXO44Q9H4M3 255 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 MAN1B1Q9UKM7 699 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 RAB23Q9ULC3 237 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 SPTBN4Q9H254 2564 aa25.17■■□□□ 1.62
CDKN2A-203ENST00000380151 HHLA1C9JL84 531 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 SLC9A3R1O14745 358 aaPredicted RBP25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 CYP26A1O43174 497 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 HRO43593 1189 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 ATG13O75143 517 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 OPRD1P41143 372 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 PXNP49023 591 aaPredicted RBP25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 LRRC63Q05C16 580 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 FBXO43Q4G163 708 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 KIAA1958Q8N8K9 716 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 RPLP0P6Q8NHW5 317 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 SECISBP2LQ93073 1101 aaKnown RBP25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 NACA2Q9H009 215 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 GMEB2Q9UKD1 530 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 SLC8A2Q9UPR5 921 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 MYO16Q9Y6X6 1858 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 ATG2BQ96BY7 2078 aa25.16■■□□□ 1.62
CDKN2A-203ENST00000380151 PSMA7O14818 248 aa25.15■■□□□ 1.62
CDKN2A-203ENST00000380151 TLR5O60602 858 aa25.15■■□□□ 1.62
CDKN2A-203ENST00000380151 HOXA6P31267 233 aa25.15■■□□□ 1.62
CDKN2A-203ENST00000380151 SIM2Q14190 667 aaPredicted RBP25.15■■□□□ 1.62
CDKN2A-203ENST00000380151 DHCR24Q15392 516 aa25.15■■□□□ 1.62
CDKN2A-203ENST00000380151 GTPBP4Q9BZE4 634 aaKnown RBP25.15■■□□□ 1.62
CDKN2A-203ENST00000380151 CISHQ9NSE2 258 aa25.15■■□□□ 1.62
CDKN2A-203ENST00000380151 DMXL1Q9Y485 3027 aa25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 GADD45BO75293 160 aaPredicted RBP25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 IRF1P10914 325 aa25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 CD44P16070 742 aaKnown RBP25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 ACO1P21399 889 aaKnown RBP25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 ID4P47928 161 aa25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 STIM1Q13586 685 aa25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 PPP1R26Q5T8A7 1209 aaPredicted RBP25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 WDR5BQ86VZ2 330 aa25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 ADGRG2Q8IZP9 1017 aa25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 TATDN2Q93075 761 aa25.14■■□□□ 1.62
CDKN2A-203ENST00000380151 DNAI2Q9GZS0 605 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms