RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CCDC15Q0P6D6 951 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 CYTH1Q15438 398 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 PYDC1Q8WXC3 89 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 PDCD2LQ9BRP1 358 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 TRPV6Q9H1D0 765 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 ADAM7Q9H2U9 754 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 DENND2DQ9H6A0 471 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-202ENST00000379826 HOXC10Q9NYD6 342 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 PAK5Q9P286 719 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 FZD1Q9UP38 647 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 ATP9BO43861 1147 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ABHD2P08910 425 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 SERPINB5P36952 375 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
SMAD9-202ENST00000379826 NOMO3P69849 1222 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 MCL1Q07820 350 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 DAW1Q8N136 415 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 GPC2Q8N158 579 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 TNFSF9P41273 254 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 AP3M2P53677 418 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 WDR4P57081 412 aaKnown RBP11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ITKQ08881 620 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ANKRD22Q5VYY1 191 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 TATDN1Q6P1N9 297 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 MCUQ8NE86 351 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 SNX25Q9H3E2 840 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ADA2Q9NZK5 511 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 SPDYE5A6NIY4 337 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 JAG1P78504 1218 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ANKRD20A4Q4UJ75 823 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 TRIML2Q8N7C3 387 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 CCNYL1Q8N7R7 359 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 PRPF31Q8WWY3 499 aaKnown RBP11.82□□□□□ -0.52
SMAD9-202ENST00000379826 CLPTM1LQ96KA5 538 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 EBF2Q9HAK2 575 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 MYOZ2Q9NPC6 264 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 NMRK2Q9NPI5 230 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 MSRAQ9UJ68 235 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 CCDC88AQ3V6T2 1871 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ADCY3O60266 1144 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 CSDE1O75534 798 aaKnown RBP11.82□□□□□ -0.52
SMAD9-202ENST00000379826 WFS1O76024 890 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ALADP13716 330 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ATP6V1B1P15313 513 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ADSSP30520 456 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 RPL22P35268 128 aaKnown RBP11.82□□□□□ -0.52
SMAD9-202ENST00000379826 HIRAP54198 1017 aaPredicted RBP11.82□□□□□ -0.52
SMAD9-202ENST00000379826 CDH8P55286 799 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 MPP2Q14168 576 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 GOLGA7BQ2TAP0 167 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 ANO5Q75V66 913 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 SLC26A11Q86WA9 606 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 PLEKHO2Q8TD55 490 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 NMD3Q96D46 503 aaKnown RBP11.82□□□□□ -0.52
SMAD9-202ENST00000379826 MMP19Q99542 508 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 SAR1AQ9NR31 198 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 GTSE1Q9NYZ3 720 aa11.82□□□□□ -0.52
SMAD9-202ENST00000379826 hCG_1818297A0A087WSY0 165 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 COPAP53621 1224 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 DPYSL3Q14195 570 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 MON1BQ7L1V2 547 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 OR5B17Q8NGF7 314 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 TMA16Q96EY4 203 aaKnown RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 CEP41Q9BYV8 373 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 TXLNGYQ9BZA5 131 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 COL20A1Q9P218 1284 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 RARBP10826 455 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 HADHBP55084 474 aaKnown RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 DEUP1Q05D60 604 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 SEPT6Q14141 434 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 CNGA3Q16281 694 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 KHDC1Q4VXA5 237 aaKnown RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ZBTB41Q5SVQ8 909 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ARHGAP18Q8N392 663 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 GLIS1Q8NBF1 620 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ASAP3Q8TDY4 903 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 SEC14L1Q92503 715 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 EXT2Q93063 718 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 EPB41L4BQ9H329 900 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 C17orf75Q9HAS0 396 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 PDP2Q9P2J9 529 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 EPS15L1Q9UBC2 864 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ASTN2O75129 1339 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ITGB4P16144 1822 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 USP1O94782 785 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ENO3P13929 434 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-202ENST00000379826 AMHR2Q16671 573 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 HSP90AA5PQ58FG0 334 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 KRT80Q6KB66 452 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 RGMBQ6NW40 437 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 LGALS13Q9UHV8 139 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 LRCH1Q9Y2L9 728 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 ACVR2BQ13705 512 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 CRY2Q49AN0 593 aa11.81□□□□□ -0.52
SMAD9-202ENST00000379826 C16orf46Q6P387 395 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms