RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MAK16Q9BXY0 300 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 LGALS13Q9UHV8 139 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 GJD2Q9UKL4 321 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 A0A087WUV0 522 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 GMNCA6NCL1 334 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 KPNA7A9QM74 516 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 SGK1O00141 431 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 PPEF2O14830 753 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 MCF2LO15068 1137 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 TRAPPC3O43617 180 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 ACSL3O95573 720 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 LRPAP1P30533 357 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 SDC4P31431 198 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 MAGEA4P43358 317 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 PTPN9P43378 593 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 CCT5P48643 541 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 TRIM32Q13049 653 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 GPS1Q13098 491 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 CCL14Q16627 93 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 SOWAHAQ2M3V2 549 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 SMTNL2Q2TAL5 461 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 RNASEH2BQ5TBB1 312 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 SRLQ86TD4 932 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 ACOT1Q86TX2 421 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 RSPH3Q86UC2 560 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 TTC30AQ86WT1 665 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 HACE1Q8IYU2 909 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 ANKRD52Q8NB46 1076 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 APPL2Q8NEU8 664 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 RSAD2Q8WXG1 361 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 C18orf25Q96B23 403 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 TNIP3Q96KP6 325 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 FAM118BQ9BPY3 351 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 MTG1Q9BT17 334 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 DDX23Q9BUQ8 820 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 ADAM7Q9H2U9 754 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 SNX25Q9H3E2 840 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 IPPQ9Y573 584 aa10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 TRIP12Q14669 1992 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-201ENST00000379340 CFAP69A5D8W1 941 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 DCDC2CA8MYV0 355 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 E7EVH7 732 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 MDM4O15151 490 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 HUS1O60921 280 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CDH16O75309 829 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TGM2P21980 687 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 WARSP23381 471 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 STIP1P31948 543 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 GNL1P36915 607 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CDH6P55285 790 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 GJA9P57773 515 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 MRPS6P82932 125 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 BEX3Q00994 111 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 NR1H3Q13133 447 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 HIC1Q14526 733 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 KYNUQ16719 465 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SKIDA1Q1XH10 827 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 KCNT1Q5JUK3 1230 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 GLRA4Q5JXX5 417 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 ERMARDQ5T6L9 678 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PMF1Q6P1K2 205 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CENPUQ71F23 418 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SLC26A9Q7LBE3 791 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 NECAB2Q7Z6G3 386 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PPIL6Q8IXY8 311 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 C12orf29Q8N999 325 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 ZNF473Q8WTR7 871 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TMEM40Q8WWA1 233 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 HSPH1Q92598 858 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 ACSF2Q96CM8 615 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 HSFY1Q96LI6 401 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 GUCD1Q96NT3 240 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 XPO6Q96QU8 1125 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CCT8L2Q96SF2 557 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 APOL6Q9BWW8 343 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CHST12Q9NRB3 414 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SLC38A7Q9NVC3 462 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PCSK1NQ9UHG2 260 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 RRP15Q9Y3B9 282 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 HES2Q9Y543 173 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TRPV2Q9Y5S1 764 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 ACTL7BQ9Y614 415 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SPTBN5Q9NRC6 3674 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 C5orf60A6NFR6 353 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SMIM23A6NLE4 172 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TSHRP16473 764 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 AKAP5P24588 427 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 RGS7P49802 495 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 EIF3EP60228 445 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 DYNLT1P63172 113 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 NKX3-2P78367 333 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PDE4CQ08493 712 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 KRT81Q14533 505 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 NOMO1Q15155 1222 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CCDC142Q17RM4 750 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms