RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CLEC4CQ8WTT0 213 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 FGF14Q92915 247 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 RPP25Q9BUL9 199 aaKnown RBP12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 NUP58Q9BVL2 599 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 TTLL2Q9BWV7 592 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 FBXO44Q9H4M3 255 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 USTQ9Y2C2 406 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 CKMP06732 381 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 ARHGAP15Q53QZ3 475 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 SFMBT2Q5VUG0 894 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 SARM1Q6SZW1 724 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 IRF2BP2Q7Z5L9 587 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 GJD3Q8N144 294 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 ARL14EPQ8N8R7 260 aaPredicted RBP12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 CPA5Q8WXQ8 436 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 UHRF1Q96T88 793 aaPredicted RBP12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 CCSER2Q9H7U1 834 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 NMUR1Q9HB89 426 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 PNPLA8Q9NP80 782 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 NAGPAQ9UK23 515 aa12.34□□□□□ -0.43
DEPDC4-202ENST00000378244 A0A1W2PQH9 124 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 E5RJQ4 531 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 TBX18O95935 607 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 ZBED1O96006 694 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 HDCP19113 662 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 AVPR1AP37288 418 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 PDCLQ13371 301 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CEP295NLQ96MC4 621 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CPXM1Q96SM3 734 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 NACA2Q9H009 215 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 SYNCQ9H7C4 482 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 AVENQ9NQS1 362 aaPredicted RBP12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 OSER1Q9NX31 292 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 SMPD4Q9NXE4 827 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 PRKAG3Q9UGI9 489 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 PCDHGC3Q9UN70 934 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 DAAM1Q9Y4D1 1078 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CEP83Q9Y592 693 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 SCAMP3O14828 347 aaKnown RBP12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 FGF19O95750 216 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 FERP16591 822 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CHRNB2P17787 502 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 ZNF75DP51815 510 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 ADKP55263 362 aaKnown RBP12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CDR2Q01850 454 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 ASIC2Q16515 512 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 FIGNQ5HY92 759 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CMTM8Q8IZV2 173 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 SLC30A5Q8TAD4 765 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 EDEM1Q92611 657 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 RNF38Q9H0F5 515 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 HAUS4Q9H6D7 363 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 TASP1Q9H6P5 420 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 KCNK12Q9HB15 430 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 GDE1Q9NZC3 331 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 IL37Q9NZH6 218 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CAPN11Q9UMQ6 739 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 USP3Q9Y6I4 520 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
DEPDC4-202ENST00000378244 YJEFN3A6XGL0 299 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 LOC730098B7Z3J9 87 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 E7ENQ6 273 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 PRAMEF12O95522 483 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 FMO1Q01740 532 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 KLHL30Q0D2K2 578 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 TDRD12Q587J7 1177 aaKnown RBP12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 TANGO2Q6ICL3 276 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 SCD5Q86SK9 330 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 PHLDB2Q86SQ0 1253 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 TMEM35BQ8NCS4 154 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 PPP1R13BQ96KQ4 1090 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 ASB16Q96NS5 453 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 PCDHB18PQ96TA0 734 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 UBXN6Q9BZV1 441 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 SMOC2Q9H3U7 446 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 TLR8Q9NR97 1041 aaKnown RBP12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 SCML2Q9UQR0 700 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 ITIH6Q6UXX5 1313 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 DOCK8Q8NF50 2099 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 FAM92AA1XBS5 289 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 TMCO5BA8MYB1 307 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 MDM4O15151 490 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 TLR5O60602 858 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 CCDC172P0C7W6 258 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 ZBED6P86452 979 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 HFE2Q6ZVN8 426 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 MON1AQ86VX9 555 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 DNAAF5Q86Y56 855 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms