RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TMEM143Q96AN5 459 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 TDRD3Q9H7E2 651 aaKnown RBP10.15□□□□□ -0.78
SPEN-201ENST00000375759 NR5A2O00482 541 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 ATG16L2Q8NAA4 619 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 ANKRD49Q8WVL7 239 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 HPDLQ96IR7 371 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 CAMKK2Q96RR4 588 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 DMAP1Q9NPF5 467 aaPredicted RBP10.15□□□□□ -0.78
SPEN-201ENST00000375759 AVENQ9NQS1 362 aaPredicted RBP10.15□□□□□ -0.78
SPEN-201ENST00000375759 COL15A1P39059 1388 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 E9PBE3 544 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 ZNF543Q08ER8 600 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 DRG1Q9Y295 367 aaKnown RBP10.15□□□□□ -0.78
SPEN-201ENST00000375759 C1orf232A0A0U1RR37 186 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 LINC00854A0A1B0GVQ3 168 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 VPS26AO75436 327 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 NFYCQ13952 458 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 EMC2Q15006 297 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 FBXO36Q8NEA4 188 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 C1orf50Q9BV19 199 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 C6orf62Q9GZU0 229 aaPredicted RBP10.15□□□□□ -0.78
SPEN-201ENST00000375759 THAP2Q9H0W7 228 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 HPS4Q9NQG7 708 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 MYRFQ9Y2G1 1151 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 STARD13Q9Y3M8 1113 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 F8VZ95 297 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 FAM200BP0CF97 657 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 C21orf59P57076 290 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 ILF2Q12905 390 aaKnown RBP10.15□□□□□ -0.78
SPEN-201ENST00000375759 DGUOKQ16854 277 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 CCDC153Q494R4 210 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 MFSD14CQ5VZR4 134 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 PLA2G4FQ68DD2 849 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 REXO1L1PQ8IX06 675 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 CRLS1Q9UJA2 301 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 KLHL20Q9Y2M5 609 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 SPACA6W5XKT8 324 aa10.15□□□□□ -0.78
SPEN-201ENST00000375759 SF3B1O75533 1304 aaKnown RBP eCLIP10.15□□□□□ -0.792e-6■■■■■ 60.9
SPEN-201ENST00000375759 PEX1O43933 1283 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 YAF2Q8IY57 180 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 BTBD10Q9BSF8 475 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 KATNAL1Q9BW62 490 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 CINPQ9BW66 212 aaPredicted RBP10.15□□□□□ -0.79
SPEN-201ENST00000375759 TIGD7Q6NT04 549 aaPredicted RBP10.15□□□□□ -0.79
SPEN-201ENST00000375759 KLHL17Q6TDP4 642 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 RORBQ92753 470 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 YIPF2Q9BWQ6 316 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 REXO4Q9GZR2 422 aaKnown RBP10.15□□□□□ -0.79
SPEN-201ENST00000375759 MTMR4Q9NYA4 1195 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 L1RE1Q9UN81 338 aa10.15□□□□□ -0.79
SPEN-201ENST00000375759 RPA1P27694 616 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 LTKP29376 864 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 ARL4DP49703 201 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 DEFB107AQ8IZN7 70 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 LRRC40Q9H9A6 602 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 CEP152O94986 1710 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 POLRMTO00411 1230 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 PPIDQ08752 370 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 ATP1A4Q13733 1029 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 KRT77Q7Z794 578 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 SETD9Q8NE22 299 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 PAFAH2Q99487 392 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 CDC42EP4Q9H3Q1 356 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 PNPLA4P41247 253 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 RPS7P62081 194 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 C16orf72Q14CZ0 275 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 ATF7IP2Q5U623 682 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 BNIPLQ7Z465 357 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 ERO1BQ86YB8 467 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 GPR101Q96P66 508 aaPredicted RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 ZNF682O95780 498 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 CHSY1Q86X52 802 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 ZNF512Q96ME7 567 aaPredicted RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 FAM49BQ9NUQ9 324 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 VTI1BQ9UEU0 232 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 POLG2Q9UHN1 485 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 PRKAA2P54646 552 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 CUL2Q13617 745 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 SLC26A11Q86WA9 606 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 WDR36Q8NI36 951 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 ZNF184Q99676 751 aaPredicted RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 PACSIN1Q9BY11 444 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 PRMT7Q9NVM4 692 aaPredicted RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.14□□□□□ -0.794e-6■□□□□ 8.7
SPEN-201ENST00000375759 ABT1Q9ULW3 272 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 STK25O00506 426 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 GEMP55040 296 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 ZNF668Q96K58 619 aaPredicted RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 TSEN34Q9BSV6 310 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 DYTNA2CJ06 578 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 GSTM1P09488 218 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 PDHBP11177 359 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 AVPR1AP37288 418 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 SPP2Q13103 211 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 MTM1Q13496 603 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 EXD1Q8NHP7 514 aa10.14□□□□□ -0.79
SPEN-201ENST00000375759 CNOT7Q9UIV1 285 aaKnown RBP10.14□□□□□ -0.79
SPEN-201ENST00000375759 OSCP1Q8WVF1 389 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms