RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NRBP2Q9NSY0 501 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 GJD2Q9UKL4 321 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 TRIM33Q9UPN9 1127 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 PAPPA2Q9BXP8 1791 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CYTH3O43739 400 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 GCATO75600 419 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 BEST1O76090 585 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 UBTFL1P0CB47 393 aaPredicted RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 CLUP10909 449 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ANXA8P13928 327 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CHRM3P20309 590 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 PDIA3P30101 505 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 LIG3P49916 1009 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CASP6P55212 293 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 BLMHQ13867 455 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 PON2Q15165 354 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CCDC85BQ15834 202 aaPredicted RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 XKR3Q5GH77 459 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ANXA8L1Q5VT79 327 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ZNF765Q7L2R6 523 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 HDXQ7Z353 690 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ZNF671Q8TAW3 534 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 GPT2Q8TD30 523 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 SNX27Q96L92 541 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 PRPF18Q99633 342 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 NUP85Q9BW27 656 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CARD6Q9BX69 1037 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 FBRSL1Q9HCM7 1045 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 ARHGEF38Q9NXL2 777 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 KIF17Q9P2E2 1029 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 NSFL1CQ9UNZ2 370 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 RANBP2P49792 3224 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 SYCE3A1L190 88 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 TMEM232C9JQI7 657 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 TACC1O75410 805 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 ALBP02768 609 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 CHN1P15882 459 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 TAP2Q03519 686 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 PPIL2Q13356 520 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 GTF2H3Q13889 308 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 PAPD4Q6PIY7 484 aaKnown RBP9.42□□□□□ -0.9
UBR4-201ENST00000375218 CDH24Q86UP0 819 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 IRGQQ8WZA9 623 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 PFDN4Q9NQP4 134 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
UBR4-201ENST00000375218 POLR3BQ9NW08 1133 aaPredicted RBP9.42□□□□□ -0.9
UBR4-201ENST00000375218 MAD2L2Q9UI95 211 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 PLATP00750 562 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 CSTBP04080 98 aaKnown RBP9.42□□□□□ -0.9
UBR4-201ENST00000375218 ZBTB48P10074 688 aaPredicted RBP9.42□□□□□ -0.9
UBR4-201ENST00000375218 AKT1P31749 480 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 PTGER2P43116 358 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 RIPK1Q13546 671 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 CYB5D1Q6P9G0 228 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 ILDR2Q71H61 639 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 KRT74Q7RTS7 529 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 MFN1Q8IWA4 741 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 NXPE1Q8N323 547 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 OR6J1Q8NGC5 347 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 ZNF764Q96H86 408 aaPredicted RBP9.42□□□□□ -0.9
UBR4-201ENST00000375218 ISCUQ9H1K1 167 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 ZNF446Q9NWS9 450 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 NT5C1B-RDH14C9J2C7 533 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 BUB1O43683 1085 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 CLPTM1O96005 669 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 QDPRP09417 244 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 MLH1P40692 756 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 HTD2P86397 168 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 NIPAL4Q0D2K0 466 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 TCTE1Q5JU00 501 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 ZMYM1Q5SVZ6 1142 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 FDX2Q6P4F2 183 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 LRRC31Q6UY01 552 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 SULF2Q8IWU5 870 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 PRCCQ92733 491 aaPredicted RBP9.42□□□□□ -0.9
UBR4-201ENST00000375218 CDCA5Q96FF9 252 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 GIT1Q9Y2X7 761 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 SNX13Q9Y5W8 968 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 DMDP11532 3685 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 ZNF536O15090 1300 aa9.42□□□□□ -0.9
UBR4-201ENST00000375218 PRR5-ARHGAP8B1AHC4 643 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 FGF4P08620 206 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 DLDP09622 509 aaKnown RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 ARF3P61204 181 aaPredicted RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 PSMC6P62333 389 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 ARF1P84077 181 aaKnown RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 CASP8Q14790 479 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 PPP6R3Q5H9R7 873 aaPredicted RBP9.41□□□□□ -0.9
UBR4-201ENST00000375218 KLHDC7AQ5VTJ3 777 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 ATG14Q6ZNE5 492 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 CHTF18Q8WVB6 975 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 SLC47A1Q96FL8 570 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 TXN2Q99757 166 aa9.41□□□□□ -0.9
UBR4-201ENST00000375218 CLK4Q9HAZ1 481 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms