RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RAB6CQ9H0N0 254 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 PLAC1Q9HBJ0 212 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 TNFSF13BQ9Y275 285 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 MTO1Q9Y2Z2 717 aaKnown RBP13.3□□□□□ -0.28
CTPS1-202ENST00000372621 EVPLQ92817 2033 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 C2CD4BA6NLJ0 364 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 CCDC22O60826 627 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 AVILO75366 819 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 GJB1P08034 283 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 IQCF3P0C7M6 154 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 PYGBP11216 843 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 ARFIP2P53365 341 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 CDK16Q00536 496 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 MBTD1Q05BQ5 628 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 BLMHQ13867 455 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 TAF11Q15544 211 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 TREML2Q5T2D2 321 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 DARS2Q6PI48 645 aaKnown RBP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 PLPPR4Q7Z2D5 763 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 PRPF39Q86UA1 669 aaKnown RBP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 BTBD10Q9BSF8 475 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 MINDY3Q9H8M7 445 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 TTLL3Q9Y4R7 772 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 SMNDC1O75940 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 HMGCRP04035 888 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 IL4RP24394 825 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 FAM47CQ5HY64 1035 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 RFWD3Q6PCD5 774 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 ZC3H18Q86VM9 953 aaKnown RBP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 APOBEC3FQ8IUX4 373 aaKnown RBP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 CFAP61Q8NHU2 1237 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 FBXO41Q8TF61 875 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 PRR11Q96HE9 360 aaPredicted RBP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 ADPGKQ9BRR6 497 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 CNPY3Q9BT09 278 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 TUBB6Q9BUF5 446 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 TMEM120AQ9BXJ8 343 aa13.29□□□□□ -0.28
CTPS1-202ENST00000372621 RPF1Q9H9Y2 349 aaKnown RBP13.29□□□□□ -0.28
CTPS1-202ENST00000372621 HAUS5O94927 633 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 INHBAP08476 426 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 SERPINB3P29508 390 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 CDC25CP30307 473 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 CDH6P55285 790 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 YWHAZP63104 245 aaKnown RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 FAM102AQ5T9C2 384 aaPredicted RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 WDR78Q5VTH9 848 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 FAM91A1Q658Y4 838 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 RNF157Q96PX1 679 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 ASCC2Q9H1I8 757 aaPredicted RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 M0QYV0 167 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 GPR25O00155 361 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 SOCS7O14512 581 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 GSC2O15499 205 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 LUC7L3O95232 432 aaKnown RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 BGNP21810 368 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 PAX7P23759 505 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 MAGEA6P43360 314 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 KRT72Q14CN4 511 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 CDHR3Q6ZTQ4 885 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 ILDR2Q71H61 639 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 EEPD1Q7L9B9 569 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 SLC26A11Q86WA9 606 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 NSL1Q96IY1 281 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 PIWIL1Q96J94 861 aaKnown RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 DCLRE1BQ9H816 532 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 FBXO6Q9NRD1 293 aaPredicted RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 ZNF180Q9UJW8 692 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 IKBKGQ9Y6K9 419 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 CFAP69A5D8W1 941 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 LACTBL1A8MY62 500 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 INO80B-WBP1J3KQ70 363 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 FZD9O00144 591 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 ITGB3P05106 788 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 CYP3A5P20815 502 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 GPD1P21695 349 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 YWHAGP61981 247 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 KHDC1Q4VXA5 237 aaKnown RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 SYCP2LQ5T4T6 812 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 MAP1SQ66K74 1059 aaPredicted RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 JADE1Q6IE81 842 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 PLD5Q8N7P1 536 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 NLRP4Q96MN2 994 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 INO80BQ9C086 356 aaPredicted RBP13.28□□□□□ -0.28
CTPS1-202ENST00000372621 CYP3A43Q9HB55 503 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 POPDC2Q9HBU9 364 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 GJA3Q9Y6H8 435 aa13.28□□□□□ -0.28
CTPS1-202ENST00000372621 KAT6AQ92794 2004 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 LMNAP02545 664 aaKnown RBP13.27□□□□□ -0.28
CTPS1-202ENST00000372621 VDRP11473 427 aa13.27□□□□□ -0.28
CTPS1-202ENST00000372621 PRKCHP24723 683 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms