RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 HECTD3Q5T447 861 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 ZNF658Q5TYW1 1059 aaPredicted RBP18.11■□□□□ 0.49
LRRC42-202ENST00000371368 SNX30Q5VWJ9 437 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 KRT39Q6A163 491 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 FILIP1Q7Z7B0 1213 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 ADGRG2Q8IZP9 1017 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 KIAA1958Q8N8K9 716 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 CCDC150Q8NCX0 1101 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 EZH1Q92800 747 aaPredicted RBP18.11■□□□□ 0.49
LRRC42-202ENST00000371368 GSDMAQ96QA5 445 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 TWNKQ96RR1 684 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 NT5C1AQ9BXI3 368 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 NIF3L1Q9GZT8 377 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 CFAP97Q9P2B7 532 aa18.11■□□□□ 0.49
LRRC42-202ENST00000371368 OTOGLQ3ZCN5 2332 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 SLC9A3R1O14745 358 aaPredicted RBP18.1■□□□□ 0.49
LRRC42-202ENST00000371368 COCHO43405 550 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 ADORA2BP29275 332 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 SRSF5Q13243 272 aaKnown RBP18.1■□□□□ 0.49
LRRC42-202ENST00000371368 SIM2Q14190 667 aaPredicted RBP18.1■□□□□ 0.49
LRRC42-202ENST00000371368 COBLL1Q53SF7 1204 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 PRR23BQ6ZRT6 265 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 DDX42Q86XP3 938 aaKnown RBP eCLIP18.1■□□□□ 0.49
LRRC42-202ENST00000371368 GPR161Q8N6U8 529 aaKnown RBP18.1■□□□□ 0.49
LRRC42-202ENST00000371368 CYFIP2Q96F07 1278 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 TIGD1Q96MW7 591 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 HNRNPABQ99729 332 aaKnown RBP18.1■□□□□ 0.49
LRRC42-202ENST00000371368 GMIPQ9P107 970 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 SLC8A2Q9UPR5 921 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 PCDHA5Q9Y5H7 936 aa18.1■□□□□ 0.49
LRRC42-202ENST00000371368 SCAMP3O14828 347 aaKnown RBP18.09■□□□□ 0.49
LRRC42-202ENST00000371368 STX10O60499 249 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 CILPO75339 1184 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 ZDHHC11BP0C7U3 371 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 FAM200BP0CF97 657 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 EPB41P11171 864 aaKnown RBP18.09■□□□□ 0.49
LRRC42-202ENST00000371368 CD58P19256 250 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 LAIR1Q6GTX8 287 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 WDR5BQ86VZ2 330 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 FBXL13Q8NEE6 735 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 SPATA20Q8TB22 786 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 WHAMMQ8TF30 809 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 SEMA4DQ92854 862 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 ERCC4Q92889 916 aaPredicted RBP18.09■□□□□ 0.49
LRRC42-202ENST00000371368 SMARCE1Q969G3 411 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 TSG101Q99816 390 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 FBXO44Q9H4M3 255 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 CCSER2Q9H7U1 834 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 POLR3BQ9NW08 1133 aaPredicted RBP18.09■□□□□ 0.49
LRRC42-202ENST00000371368 HOOK1Q9UJC3 728 aaKnown RBP18.09■□□□□ 0.49
LRRC42-202ENST00000371368 GMEB2Q9UKD1 530 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 SPTBN4Q9H254 2564 aa18.09■□□□□ 0.49
LRRC42-202ENST00000371368 CYP17A1P05093 508 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 OPRD1P41143 372 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 PXNP49023 591 aaPredicted RBP18.08■□□□□ 0.48
LRRC42-202ENST00000371368 PGFP49763 221 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 DHCR24Q15392 516 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 GAB4Q2WGN9 574 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 ANKRD40Q6AI12 368 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 RHBDF2Q6PJF5 856 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 CLEC20AQ6ZU45 233 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 ZFRQ96KR1 1074 aaKnown RBP18.08■□□□□ 0.48
LRRC42-202ENST00000371368 GTPBP4Q9BZE4 634 aaKnown RBP18.08■□□□□ 0.48
LRRC42-202ENST00000371368 DNAI2Q9GZS0 605 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 RAB20Q9NX57 234 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 TBC1D14Q9P2M4 693 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 GPR179Q6PRD1 2367 aa18.08■□□□□ 0.48
LRRC42-202ENST00000371368 CCDC163A0A0D9SF12 145 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 E2F8A0AVK6 867 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 HHLA1C9JL84 531 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 TGM1P22735 817 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 MXI1P50539 228 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 TUBP50607 506 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 FKBP3Q00688 224 aaKnown RBP18.07■□□□□ 0.48
LRRC42-202ENST00000371368 CEP68Q76N32 757 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 GPRIN1Q7Z2K8 1008 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 ZC3H3Q8IXZ2 948 aaKnown RBP18.07■□□□□ 0.48
LRRC42-202ENST00000371368 CAMKK1Q8N5S9 505 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 RPLP0P6Q8NHW5 317 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 RMDN1Q96DB5 314 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 FAXDC2Q96IV6 333 aa18.07■□□□□ 0.48
LRRC42-202ENST00000371368 K7EQS6 105 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 SLC16A3O15427 465 aaKnown RBP18.06■□□□□ 0.48
LRRC42-202ENST00000371368 RETP07949 1114 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 SLC6A11P48066 632 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 PMS1P54277 932 aaKnown RBP18.06■□□□□ 0.48
LRRC42-202ENST00000371368 ZNF394Q53GI3 561 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 TCERG1LQ5VWI1 586 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 ISM2Q6H9L7 571 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 SYT13Q7L8C5 426 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 CCDC26Q8TAB7 109 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 TATDN2Q93075 761 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 JAKMIP2Q96AA8 810 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 HEXIM2Q96MH2 286 aaKnown RBP18.06■□□□□ 0.48
LRRC42-202ENST00000371368 NACA2Q9H009 215 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 TLR8Q9NR97 1041 aaKnown RBP18.06■□□□□ 0.48
LRRC42-202ENST00000371368 SCML2Q9UQR0 700 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 SH3BP1Q9Y3L3 701 aa18.06■□□□□ 0.48
LRRC42-202ENST00000371368 TRIM49BA6NDI0 452 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms