RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TCEAL5Q5H9L2 206 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 KCNT2Q6UVM3 1135 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SND1Q7KZF4 910 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 DYMQ7RTS9 669 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 TRIML1Q8N9V2 468 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 ATRIPQ8WXE1 791 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PAGE5Q96GU1 130 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 GPR62Q9BZJ7 368 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SAMSN1Q9NSI8 373 aaKnown RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SEL1LQ9UBV2 794 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 LRWD1Q9UFC0 647 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 EFR3BQ9Y2G0 817 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 FRMD4BQ9Y2L6 1034 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SOBPA7XYQ1 873 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 E7EVH7 732 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 NOP56O00567 594 aaKnown RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 DKC1O60832 514 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 KIF4AO95239 1232 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 TROVE2P10155 538 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SKIP12755 728 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 ALOX15P16050 662 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SMAD4Q13485 552 aaKnown RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 TRIM14Q14142 442 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 DCAF4L1Q3SXM0 396 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 ERMARDQ5T6L9 678 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PPFIBP1Q86W92 1011 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PHTF2Q8N3S3 785 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 NACC2Q96BF6 587 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 CNOT10Q9H9A5 744 aaKnown RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 MAGEC2Q9UBF1 373 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SEPT9Q9UHD8 586 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 REXO2Q9Y3B8 237 aaKnown RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 KMT2BQ9UMN6 2715 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SMIM28A0A1B0GU29 152 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 ADAM12O43184 909 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 ASLP04424 464 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 NEK2P51955 445 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 BNIP1Q12981 228 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PPP1R7Q15435 360 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 RTP2Q5QGT7 225 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 KRT79Q5XKE5 535 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PACS1Q6VY07 963 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PAQR9Q6ZVX9 377 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 CREG2Q8IUH2 290 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 ANKS4BQ8N8V4 417 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 WHAMMQ8TF30 809 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 CPB2Q96IY4 423 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 SUSD3Q96L08 255 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 BCO2Q9BYV7 579 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 GPR88Q9GZN0 384 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 IL21Q9HBE4 155 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PVALEFA0A1B0GWK0 134 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 DDX39AO00148 427 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 C4BPAP04003 597 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ZDHHC11BP0C7U3 371 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 LAG3P18627 525 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 GARTP22102 1010 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TNFSF9P41273 254 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PEX5P50542 639 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CLCN2P51788 898 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 EFNA5P52803 228 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ADKP55263 362 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 RAB33AQ14088 237 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CDKAL1Q5VV42 579 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 MPZL3Q6UWV2 235 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 SNX29Q8TEQ0 813 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ITPKCQ96DU7 683 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 DDX27Q96GQ7 796 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 DHTKD1Q96HY7 919 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 C2orf40Q9H1Z8 148 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 VPS16Q9H269 839 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ADAM7Q9H2U9 754 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 LZTFL1Q9NQ48 299 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 EXOC1Q9NV70 894 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 NDUFA13Q9P0J0 144 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CTTNBP2NLQ9P2B4 639 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 KIAA1024Q9UPX6 916 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 KANSL1LA0AUZ9 987 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PDE2AO00408 941 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 GABBR2O75899 941 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 OCRLQ01968 901 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 MTERF2Q49AM1 385 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 SPDYAQ5MJ70 313 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PPP2R2DQ66LE6 453 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CCDC70Q6NSX1 233 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 RETREG2Q8NC44 543 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 CCDC197Q8NCU1 140 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PPP1R14CQ8TAE6 165 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 RAPGEF5Q92565 580 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 TLCD1Q96CP7 247 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 PBKQ96KB5 322 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ZFRQ96KR1 1074 aaKnown RBP7.22□□□□□ -1.25
CSDE1-204ENST00000369530 UROC1Q96N76 676 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 KIFC3Q9BVG8 833 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 SPATA16Q9BXB7 569 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 FAM129AQ9BZQ8 928 aa7.22□□□□□ -1.25
CSDE1-204ENST00000369530 ZCWPW1Q9H0M4 648 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms