RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 SAMD3Q8N6K7 520 aa12.63□□□□□ -0.39
CCDC144A-204ENST00000360524 ANKRD27Q96NW4 1050 aa12.63□□□□□ -0.39
CCDC144A-204ENST00000360524 ZSWIM1Q9BR11 485 aa12.63□□□□□ -0.39
CCDC144A-204ENST00000360524 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC144A-204ENST00000360524 CDY2AQ9Y6F7 541 aa12.63□□□□□ -0.39
CCDC144A-204ENST00000360524 CDY1Q9Y6F8 540 aa12.63□□□□□ -0.39
CCDC144A-204ENST00000360524 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 STAG3L1P0CL83 205 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 GLRBP48167 497 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 BACE1P56817 501 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 HERVK_113P62684 666 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 GMCL1P1Q8NEA9 526 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 MIEF2Q96C03 454 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 ABI2Q9NYB9 513 aaPredicted RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 H2AFY2Q9P0M6 372 aaPredicted RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 MED24O75448 989 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 SUPT20HL2P0C7V6 817 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 NAMPTP43490 491 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 RERGLQ9H628 205 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 RMI1Q9H9A7 625 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 ADARB2Q9NS39 739 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 GPATCH2LQ9NWQ4 482 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 DAPK2Q9UIK4 370 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 OGTO15294 1046 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 PMPCBO75439 489 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 LRG1P02750 347 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 RGS4P49798 205 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 NAPEPLDQ6IQ20 393 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 KAT2BQ92831 832 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 PLEKHA8Q96JA3 519 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 SERPINB12Q96P63 405 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 PRG3Q9Y2Y8 225 aaPredicted RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 H0YC42 278 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 ALDH7A1P49419 539 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 ADARP55265 1226 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 KCNMA1Q12791 1236 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 C16orf72Q14CZ0 275 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 GLRA4Q5JXX5 417 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 GPR63Q9BZJ6 419 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 MROH8Q9H579 483 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 GPRC5CQ9NQ84 441 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 DDX18Q9NVP1 670 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 ADAMTS13Q76LX8 1427 aa12.62□□□□□ -0.39
CCDC144A-204ENST00000360524 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 H7C4K7 107 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 USP1O94782 785 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 SREBF1P36956 1147 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 POU4F1Q01851 419 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 PTK6Q13882 451 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 ERO1BQ86YB8 467 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 RIBC1Q8N443 379 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 UNKQ9C0B0 810 aaKnown RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 CAPN6Q9Y6Q1 641 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 NRXN1Q9ULB1 1477 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 LINC00854A0A1B0GVQ3 168 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 TFRCP02786 760 aaKnown RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 MMP14P50281 582 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 MPZL3Q6UWV2 235 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 CINPQ9BW66 212 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 TMBIM4Q9HC24 238 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 DIP2BQ9P265 1576 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 UBOX5O94941 541 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 ALBP02768 609 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 PGK2P07205 417 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 SLC2A3P11169 496 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 MFSD4BQ5TF39 518 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 FAM180AQ6UWF9 173 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 PRUNE1Q86TP1 453 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 ELMO3Q96BJ8 720 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 RTFDC1Q9BY42 306 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 EHD4Q9H223 541 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 HNRNPRO43390 633 aaKnown RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 ARL4DP49703 201 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 WASHC5Q12768 1159 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 BOLA3Q53S33 107 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 OTOAQ7RTW8 1153 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 MTERF3Q96E29 417 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 KLHL4Q9C0H6 718 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 CYP4F12Q9HCS2 524 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 DOLKQ9UPQ8 538 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 A0A087X0T9 212 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 FOXN3O00409 490 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 FAM228BP0C875 321 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 ARP10275 920 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 TGM2P21980 687 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 SLC16A1P53985 500 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 NFIAQ12857 509 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 Q4G0T1 1027 aa12.61□□□□□ -0.39
CCDC144A-204ENST00000360524 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms