RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 ELAC1Q9H777 363 aaKnown RBP12.54□□□□□ -0.4
SYN3-202ENST00000358763 NRDE2Q9H7Z3 1164 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYN3-202ENST00000358763 PCYOX1Q9UHG3 505 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 TTC3P53804 2025 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 C3orf70A6NLC5 250 aaPredicted RBP12.54□□□□□ -0.4
SYN3-202ENST00000358763 PRPSAP2O60256 369 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 UPP2O95045 317 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 ACAP1Q15027 740 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 TFDP3Q5H9I0 405 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 FBXO46Q6PJ61 603 aaPredicted RBP12.54□□□□□ -0.4
SYN3-202ENST00000358763 MAIP1Q8WWC4 291 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 APBB2Q92870 758 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 B3GALT6Q96L58 329 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 LRRC19Q9H756 370 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYN3-202ENST00000358763 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
SYN3-202ENST00000358763 DPYSL4O14531 572 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 TADA2AO75478 443 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 KDELR1P24390 212 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 ECHS1P30084 290 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 PCK1P35558 622 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 HFE2Q6ZVN8 426 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 KCTD6Q8NC69 237 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 SMARCD1Q96GM5 515 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 CALN1Q9BXU9 219 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 ULBP1Q9BZM6 244 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 SNX24Q9Y343 169 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 TBKBP1A7MCY6 615 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 NT5C1B-RDH14C9J2C7 533 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 NRP1O14786 923 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 COL6A1P12109 1028 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 FNTAP49354 379 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.53□□□□□ -0.4
SYN3-202ENST00000358763 DEFB106AQ8N104 65 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 PAWRQ96IZ0 340 aaKnown RBP12.53□□□□□ -0.4
SYN3-202ENST00000358763 PKMYT1Q99640 499 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 RAB17Q9H0T7 212 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 RASAL2Q9UJF2 1139 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 FAM187AA6NFU0 413 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
SYN3-202ENST00000358763 MAP2K7O14733 419 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 CXCL10P02778 98 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 TYMPP19971 482 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 HDAC4P56524 1084 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
SYN3-202ENST00000358763 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
SYN3-202ENST00000358763 TSPY1Q01534 308 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 TRIP13Q15645 432 aaPredicted RBP12.53□□□□□ -0.4
SYN3-202ENST00000358763 FAM171BQ6P995 826 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 TBCBQ99426 244 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 SAE1Q9UBE0 346 aaPredicted RBP12.53□□□□□ -0.4
SYN3-202ENST00000358763 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
SYN3-202ENST00000358763 SYNJ2BP-COX16A0A087WUM0 186 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 TJP3O95049 919 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 ECEL1O95672 775 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 HSPA8P11142 646 aaKnown RBP12.52□□□□□ -0.4
SYN3-202ENST00000358763 SLC11A1P49279 550 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 CDH6P55285 790 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 KRT17Q04695 432 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 PPP1R7Q15435 360 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 ZC3H12AQ5D1E8 599 aaKnown RBP12.52□□□□□ -0.4
SYN3-202ENST00000358763 EFHC1Q5JVL4 640 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 DUPD1Q68J44 220 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 TOX2Q96NM4 488 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.52□□□□□ -0.4
SYN3-202ENST00000358763 COX16Q9P0S2 106 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 CALCOCO1Q9P1Z2 691 aa12.52□□□□□ -0.4
SYN3-202ENST00000358763 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 HSF2BPO75031 334 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 USP17L7P0C7H9 530 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 LBX1P52954 281 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 COPS2P61201 443 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 CUL1Q13616 776 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 CA9Q16790 459 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 SLC39A12Q504Y0 691 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 DCAF6Q58WW2 860 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 EMBQ6PCB8 327 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 SPATA18Q8TC71 538 aa12.52□□□□□ -0.41
SYN3-202ENST00000358763 SNRNP25Q9BV90 132 aaKnown RBP12.52□□□□□ -0.41
SYN3-202ENST00000358763 ARHGEF37A1IGU5 675 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 YJEFN3A6XGL0 299 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 E7ENQ6 273 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 ATP8B1O43520 1251 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 CST8O60676 142 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 DESP17661 470 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 SCNN1AP37088 669 aa12.51□□□□□ -0.41
SYN3-202ENST00000358763 PTPN9P43378 593 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms