RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 DNALI1O14645 258 aaPredicted RBP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 F2P00734 622 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 AGTP01019 485 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 KRT7P08729 469 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 CCDC142Q17RM4 750 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 SCUBE3Q8IX30 993 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 CNOT10Q9H9A5 744 aaKnown RBP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 ETAA1Q9NY74 926 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 WDR35Q9P2L0 1181 aa16.74■□□□□ 0.27
PTPN5-201ENST00000358540 GNEQ9Y223 722 aaKnown RBP16.74■□□□□ 0.27
PTPN5-201ENST00000358540 SCN4AP35499 1836 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 A6NJR5 290 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 PIAS1O75925 651 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 DARSP14868 501 aaKnown RBP16.73■□□□□ 0.27
PTPN5-201ENST00000358540 ADORA2BP29275 332 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 MMP13P45452 471 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 RBBP5Q15291 538 aaKnown RBP16.73■□□□□ 0.27
PTPN5-201ENST00000358540 NBPF20Q3BBV1 942 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 DCAF4L1Q3SXM0 396 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 ARHGEF2Q92974 986 aaKnown RBP16.73■□□□□ 0.27
PTPN5-201ENST00000358540 ZNF317Q96PQ6 595 aaPredicted RBP16.73■□□□□ 0.27
PTPN5-201ENST00000358540 NGRNQ9NPE2 291 aaKnown RBP16.73■□□□□ 0.27
PTPN5-201ENST00000358540 SLC5A4Q9NY91 659 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 CACNG4Q9UBN1 327 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 RRN3P2A6NIE6 340 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 A8MUI8 341 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 CCDC130P13994 396 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 MAGEA4P43358 317 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 CDH6P55285 790 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 COPS2P61201 443 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 CAV1Q03135 178 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 MAP2K5Q13163 448 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 TAF1CQ15572 869 aaPredicted RBP16.73■□□□□ 0.27
PTPN5-201ENST00000358540 LCLAT1Q6UWP7 414 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 POLNQ7Z5Q5 900 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 KIF2BQ8N4N8 673 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 ANKRD42Q8N9B4 389 aa16.73■□□□□ 0.27
PTPN5-201ENST00000358540 PRMT1Q99873 361 aaKnown RBP16.73■□□□□ 0.27
PTPN5-201ENST00000358540 CFAP73A6NFT4 308 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 TRUB2O95900 331 aaKnown RBP16.72■□□□□ 0.27
PTPN5-201ENST00000358540 GSTA1P08263 222 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 NQO1P15559 274 aaKnown RBP16.72■□□□□ 0.27
PTPN5-201ENST00000358540 GPD1P21695 349 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 KYAT1Q16773 422 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 ZC3H18Q86VM9 953 aaKnown RBP16.72■□□□□ 0.27
PTPN5-201ENST00000358540 CLEC4CQ8WTT0 213 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 NRCAMQ92823 1304 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 UBOX5O94941 541 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 LMNB2Q03252 620 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 ANKRD22Q5VYY1 191 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 ANKMY2Q8IV38 441 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 SLC35B2Q8TB61 432 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 FNIP1Q8TF40 1166 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 INTS9Q9NV88 658 aaKnown RBP16.72■□□□□ 0.27
PTPN5-201ENST00000358540 ZSWIM8A7E2V4 1837 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 A8MXQ7 604 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 SPTLC1O15269 473 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 ZNF865P0CJ78 1059 aaPredicted RBP16.72■□□□□ 0.27
PTPN5-201ENST00000358540 TFE3P19532 575 aaPredicted RBP16.72■□□□□ 0.27
PTPN5-201ENST00000358540 LMO2P25791 158 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 GABRB2P47870 512 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 UNC45BQ8IWX7 931 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 ZCCHC9Q8N567 271 aaKnown RBP16.72■□□□□ 0.27
PTPN5-201ENST00000358540 FAM71DQ8N9W8 422 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 BEST2Q8NFU1 509 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 KCNV2Q8TDN2 545 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 TMEM109Q9BVC6 243 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 KCNK9Q9NPC2 374 aa16.72■□□□□ 0.27
PTPN5-201ENST00000358540 C2CD4BA6NLJ0 364 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 SNUPNO95149 360 aaKnown RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 PSEN2P49810 448 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 SNX17Q15036 470 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 SOWAHAQ2M3V2 549 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 ZC3H12AQ5D1E8 599 aaKnown RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 MORN1Q5T089 497 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 C1orf228Q6PIY5 440 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 PIGWQ7Z7B1 504 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 BBOF1Q8ND07 529 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 ATXN2LQ8WWM7 1075 aaKnown RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 NKD2Q969F2 451 aaPredicted RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 ASNSD1Q9NWL6 643 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 CORO1CQ9ULV4 474 aaPredicted RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 HGSO14964 777 aaPredicted RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 GABBR2O75899 941 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 FGFR1P11362 822 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 IGFBP6P24592 240 aaPredicted RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 ZNF157P51786 506 aaPredicted RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 ZNF143P52747 638 aaPredicted RBP16.71■□□□□ 0.27
PTPN5-201ENST00000358540 FKBP1BP68106 108 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 C9orf57Q5W0N0 161 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 BBS12Q6ZW61 710 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 ZBED8Q8IZ13 594 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 CCDC33Q8N5R6 958 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 RSAD2Q8WXG1 361 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 MAGEB5Q9BZ81 275 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 ECT2Q9H8V3 914 aa16.71■□□□□ 0.27
PTPN5-201ENST00000358540 TRIP12Q14669 1992 aaPredicted RBP16.7■□□□□ 0.26
PTPN5-201ENST00000358540 PTPN7P35236 360 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms