RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 BCL9O00512 1426 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 SEC24DO94855 1032 aaPredicted RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 KLHL2O95198 593 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 HOXD12P35452 270 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 OXCT1P55809 520 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CCNIQ14094 377 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 HNRNPDQ14103 355 aaKnown RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 FLOT2Q14254 428 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 TMEM110Q86TL2 294 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PQLC1Q8N2U9 271 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 TSPAN14Q8NG11 270 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 DEPTORQ8TB45 409 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 NLRP7Q8WX94 980 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 SEMA4DQ92854 862 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 FAM20AQ96MK3 541 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 KBTBD13C9JR72 458 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 SLC16A4O15374 487 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 RPL10AP62906 217 aaKnown RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 ALLCQ8N6M5 410 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 FAM71DQ8N9W8 422 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 DDHD1Q8NEL9 900 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PPP1R14BQ96C90 147 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TRIM11Q96F44 468 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 NACC1Q96RE7 527 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 KCNK16Q96T55 309 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 XAB2Q9HCS7 855 aaKnown RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TRNAU1APQ9NX07 287 aaKnown RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 UBAP1Q9NZ09 502 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PDE4DIPQ5VU43 2346 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TMEM247A6NEH6 219 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 DCXO43602 365 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 RAD17O75943 681 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 SERPINA6P08185 405 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 SMIM18P0DKX4 95 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 NFKBIAP25963 317 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 HALP42357 657 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PDAP1Q13442 181 aaKnown RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 CIAPIN1Q6FI81 312 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 CDHR3Q6ZTQ4 885 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PCGF5Q86SE9 256 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 EXD1Q8NHP7 514 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 LMO3Q8TAP4 145 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 USP13Q92995 863 aaPredicted RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 BTBD9Q96Q07 612 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TEKT3Q9BXF9 490 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TRIM17Q9Y577 477 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 HEY1Q9Y5J3 304 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PSTPIP1O43586 416 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 SLURP2P0DP57 97 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 CD97P48960 835 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 NUDT2P50583 147 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 SLC5A3P53794 718 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PHEXP78562 749 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TBCCQ15814 346 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 ARHGEF16Q5VV41 709 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 C16orf46Q6P387 395 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 FASTKD5Q7L8L6 764 aaKnown RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 RCOR2Q8IZ40 523 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 C17orf50Q8WW18 174 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 TMIGD2Q96BF3 282 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PPWD1Q96BP3 646 aaKnown RBP11.87□□□□□ -0.51
CNOT3-202ENST00000358389 CMTM5Q96DZ9 223 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 XPNPEP1Q9NQW7 623 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PLA2G4CQ9UP65 541 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 PCDHB4Q9Y5E5 795 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
CNOT3-202ENST00000358389 E9PBE3 544 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 KLHL41O60662 606 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 BBOX1O75936 387 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 SNRPAP09012 282 aaKnown RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 MMP10P09238 476 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 MAPK10P53779 464 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 PEX3P56589 373 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 XIAPP98170 497 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 OTUD4Q01804 1114 aaKnown RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 PACS1Q6VY07 963 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 RELL1Q8IUW5 271 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CCDC17Q96LX7 622 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 SEMA6AQ9H2E6 1030 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 FAIMQ9NVQ4 179 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 MRPL11Q9Y3B7 192 aaKnown RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 DNAJA2O60884 412 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CBFA2T3O75081 653 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 SLITRK3O94933 977 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 FOSP01100 380 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 ENO3P13929 434 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 TCF4P15884 667 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 PKNOX1P55347 436 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 KCNT1Q5JUK3 1230 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 TMEM270Q6UE05 265 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 KYAT3Q6YP21 454 aaKnown RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 RNF111Q6ZNA4 994 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 C1orf186Q6ZWK4 172 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms