RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 GTF2A2P52657 109 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 GRB14Q14449 540 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 SLC27A1Q6PCB7 646 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 C3orf62Q6ZUJ4 267 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 OR6B3Q8NGW1 331 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 FAM172AQ8WUF8 416 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 B3GNT5Q9BYG0 378 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 NXF3Q9H4D5 531 aaKnown RBP16.54■□□□□ 0.24
PHTF1-201ENST00000357783 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.54■□□□□ 0.24
PHTF1-201ENST00000357783 SLC24A2Q9UI40 661 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 MAP3K6O95382 1288 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 HOXD8P13378 290 aaPredicted RBP16.54■□□□□ 0.24
PHTF1-201ENST00000357783 TAC1P20366 129 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 PHBP35232 272 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 GEMIN4P57678 1058 aaKnown RBP16.54■□□□□ 0.24
PHTF1-201ENST00000357783 TFDP2Q14188 446 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 STILQ15468 1287 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 EFHC2Q5JST6 749 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 FAM47EQ6ZV65 393 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 NPLOC4Q8TAT6 608 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 FBF1Q8TES7 1133 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 ABHD16BQ9H3Z7 469 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 DPEP3Q9H4B8 488 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 PLEKHA5Q9HAU0 1116 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 HESX1Q9UBX0 185 aa16.54■□□□□ 0.24
PHTF1-201ENST00000357783 RASSF9O75901 435 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 GTF2A1P52655 376 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 PKDCCQ504Y2 493 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 CGB2Q6NT52 195 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 PALM2Q8IXS6 379 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 PDIK1LQ8N165 341 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 C7orf31Q8N865 590 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 RNF157Q96PX1 679 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 CHMP2BQ9UQN3 213 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 HEY1Q9Y5J3 304 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 E7ESA3 106 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 PRPF4O43172 522 aaKnown RBP eCLIP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 DYNC1LI2O43237 492 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 GPR32O75388 356 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 ASMTLO95671 621 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 CA4P22748 312 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 AKAP5P24588 427 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 SDC4P31431 198 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 RPA3P35244 121 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 SLC6A3Q01959 620 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 RNASELQ05823 741 aaKnown RBP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 FAM47CQ5HY64 1035 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 BEST2Q8NFU1 509 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 TRIM6Q9C030 488 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 FAM124BQ9H5Z6 455 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 ZMYND8Q9ULU4 1186 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-201ENST00000357783 SLC12A4Q9UP95 1085 aa16.53■□□□□ 0.24
PHTF1-201ENST00000357783 PAPSS1O43252 624 aaPredicted RBP16.52■□□□□ 0.24
PHTF1-201ENST00000357783 GABBR2O75899 941 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 RECQL4O94761 1208 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 UBOX5O94941 541 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 SMIM10L2AP0DMW4 78 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 SMIM10L2BP0DMW5 78 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 CA9Q16790 459 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 PRAMEF19Q5SWL8 479 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 NOTUMQ6P988 496 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 APBB1IPQ7Z5R6 666 aaPredicted RBP16.52■□□□□ 0.24
PHTF1-201ENST00000357783 PLEKHH3Q7Z736 793 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 MAP7D3Q8IWC1 876 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 LRRN4Q8WUT4 740 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 SPOCK2Q92563 424 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 PAFAH2Q99487 392 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 PHACTR1Q9C0D0 580 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 KLC4Q9NSK0 619 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 DERAQ9Y315 318 aa16.52■□□□□ 0.24
PHTF1-201ENST00000357783 RRN3P2A6NIE6 340 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 DNAJC8O75937 253 aaPredicted RBP16.52■□□□□ 0.23
PHTF1-201ENST00000357783 ANKRD23Q86SG2 305 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 SESTD1Q86VW0 696 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 PLD5Q8N7P1 536 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 DENND1AQ8TEH3 1009 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 SLC35F5Q8WV83 523 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 KHSRPQ92945 711 aaKnown RBP eCLIP16.52■□□□□ 0.234e-10■■■■□ 24.5
PHTF1-201ENST00000357783 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.23
PHTF1-201ENST00000357783 SNRNP25Q9BV90 132 aaKnown RBP16.52■□□□□ 0.23
PHTF1-201ENST00000357783 ACSS3Q9H6R3 686 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 PPCSQ9HAB8 311 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 PCDH18Q9HCL0 1135 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 KLK14Q9P0G3 267 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 SENP1Q9P0U3 644 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 GRID1Q9ULK0 1009 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 SMG5Q9UPR3 1016 aaKnown RBP16.52■□□□□ 0.23
PHTF1-201ENST00000357783 ARL2BPQ9Y2Y0 163 aa16.52■□□□□ 0.23
PHTF1-201ENST00000357783 GLTPD2A6NH11 291 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 A8MXQ7 604 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 DPYSL4O14531 572 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 HGSO14964 777 aaPredicted RBP16.51■□□□□ 0.23
PHTF1-201ENST00000357783 KCNN4O15554 427 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 PDGFRBP09619 1106 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 CYP2C9P11712 490 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 CCDC130P13994 396 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms