RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 TRAF4Q9BUZ4 470 aaPredicted RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 FNDC11Q9BVV2 318 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 VCPKMTQ9H867 229 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 ZNF624Q9P2J8 865 aaPredicted RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 GGA2Q9UJY4 613 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 TSC22D4Q9Y3Q8 395 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 MED23Q9ULK4 1368 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 SRRM3A6NNA2 597 aaPredicted RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 FAM171A2A8MVW0 826 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 PRR5-ARHGAP8B1AHC4 643 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 TMEM229AB2RXF0 380 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 DKC1O60832 514 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFC1-201ENST00000349703 ACTL6BO94805 426 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 COPB1P53618 953 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 OLR1P78380 273 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 MORC3Q14149 939 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 GALNT13Q8IUC8 556 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 KIAA0895Q8NCT3 520 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 EZH1Q92800 747 aaPredicted RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 TEKT5Q96M29 485 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 PAIP1Q9H074 479 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 DNAJC18Q9H819 358 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 ATP8A2Q9NTI2 1148 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 PKD2L1Q9P0L9 805 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 COX16Q9P0S2 106 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 HEY2Q9UBP5 337 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 VPS9D1Q9Y2B5 631 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 DLC1Q96QB1 1528 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 WDR19Q8NEZ3 1342 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 FAM227AF5H4B4 570 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 IGF2BP3O00425 579 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFC1-201ENST00000349703 ENPP3O14638 875 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 SLC34A2O95436 690 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 TGDSO95455 350 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 CNOT4O95628 575 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 HSMCR30P0CW71 290 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 STAT2P52630 851 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 EPHB3P54753 998 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.22□□□□□ -1.415e-6■■□□□ 11.7
RFC1-201ENST00000349703 OTUD7BQ6GQQ9 843 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 SYT9Q86SS6 491 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 C7orf61Q8IZ16 206 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 RPUSD2Q8IZ73 545 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 TTC39CQ8N584 583 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 ORAI3Q9BRQ5 295 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 GPR63Q9BZJ6 419 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 SYNDIG1Q9H7V2 258 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 MRPL44Q9H9J2 332 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 MAP3K15Q6ZN16 1313 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 CRB1P82279 1406 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 CCDC78A2IDD5 438 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 BTBD18B2RXH4 712 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 DXOO77932 396 aaKnown RBP6.21□□□□□ -1.41
RFC1-201ENST00000349703 DEXIO95424 95 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 SERPING1P05155 500 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 GSNP06396 782 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 ALAS1P13196 640 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 PCK1P35558 622 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 KRT2P35908 639 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 RXRGP48443 463 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 RWDD2BP57060 319 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 ALDH6A1Q02252 535 aaKnown RBP6.21□□□□□ -1.41
RFC1-201ENST00000349703 ACTN3Q08043 901 aaPredicted RBP6.21□□□□□ -1.41
RFC1-201ENST00000349703 PCID2Q5JVF3 399 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 NUGGCQ68CJ6 796 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 CCNI2Q6ZMN8 369 aaPredicted RBP6.21□□□□□ -1.41
RFC1-201ENST00000349703 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 CENPSQ8N2Z9 138 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 ALKBH8Q96BT7 664 aaKnown RBP6.21□□□□□ -1.41
RFC1-201ENST00000349703 MAGED4Q96JG8 741 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 HEPHQ9BQS7 1158 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 SIKE1Q9BRV8 207 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 ZBED2Q9BTP6 218 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD2Q9GZV1 360 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 ABHD10Q9NUJ1 306 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 CDC42EP3Q9UKI2 254 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 ACEP12821 1306 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 RTL9Q8NET4 1388 aa6.21□□□□□ -1.41
RFC1-201ENST00000349703 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 SOCS7O14512 581 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TNFRSF10BO14763 440 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 EEF1GP26641 437 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 STAT6P42226 847 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 MFAP4P55083 255 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 NKX3-2P78367 333 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TFCP2Q12800 502 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 PFKFB3Q16875 520 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 RCSD1Q6JBY9 416 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 LETMD1Q6P1Q0 360 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 DRICH1Q6PGQ1 229 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 ZNF589Q86UQ0 364 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 KCTD6Q8NC69 237 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 ZNF473Q8WTR7 871 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 MIEF2Q96C03 454 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 DTNBP1Q96EV8 351 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 CDHR1Q96JP9 859 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 FAM129AQ9BZQ8 928 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 FOXP3Q9BZS1 431 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 ABCB8Q9NUT2 735 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 PNPOQ9NVS9 261 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms