RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ZC3H12AQ5D1E8 599 aaKnown RBP25.05■■□□□ 1.6
NELFB-201ENST00000343053 COPS5Q92905 334 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 HEXIM2Q96MH2 286 aaKnown RBP25.05■■□□□ 1.6
NELFB-201ENST00000343053 KCNK13Q9HB14 408 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 HOXC10Q9NYD6 342 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 PCK1P35558 622 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 PEX19P40855 299 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 JADE1Q6IE81 842 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 RINLQ6ZS11 566 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 DTX3LQ8TDB6 740 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.05■■□□□ 1.6
NELFB-201ENST00000343053 SEPT1Q8WYJ6 367 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 CDT1Q9H211 546 aa25.05■■□□□ 1.6
NELFB-201ENST00000343053 TNS1Q9HBL0 1735 aaKnown RBP25.04■■□□□ 1.6
NELFB-201ENST00000343053 CENPFP49454 3210 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 ZBTB42B2RXF5 422 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 MYL2P10916 166 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 RASA2Q15283 850 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 OR6B2Q6IFH4 312 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 APOPT1Q96IL0 206 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 C12orf42Q96LP6 360 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 NR2E3Q9Y5X4 410 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 IQANK1A0A1B0GTG1 560 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 NOP56O00567 594 aaKnown RBP25.04■■□□□ 1.6
NELFB-201ENST00000343053 CYB561D2O14569 222 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 MED7O43513 233 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 MYCNP04198 464 aaPredicted RBP25.04■■□□□ 1.6
NELFB-201ENST00000343053 KPNB1Q14974 876 aaKnown RBP25.04■■□□□ 1.6
NELFB-201ENST00000343053 C12orf29Q8N999 325 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 OSBPL1AQ9BXW6 950 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 VPS11Q9H270 941 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 PPCSQ9HAB8 311 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 PIM2Q9P1W9 311 aa25.04■■□□□ 1.6
NELFB-201ENST00000343053 KRT36O76013 467 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 APRTP07741 180 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 YY1P25490 414 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 IRX4P78413 519 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 IER5Q5VY09 327 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 DNERQ8NFT8 737 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 CMASQ8NFW8 434 aaPredicted RBP25.03■■□□□ 1.6
NELFB-201ENST00000343053 RXFP2Q8WXD0 754 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 IQCGQ9H095 443 aaKnown RBP25.03■■□□□ 1.6
NELFB-201ENST00000343053 RPF1Q9H9Y2 349 aaKnown RBP25.03■■□□□ 1.6
NELFB-201ENST00000343053 SSU72Q9NP77 194 aaKnown RBP25.03■■□□□ 1.6
NELFB-201ENST00000343053 NGRNQ9NPE2 291 aaKnown RBP25.03■■□□□ 1.6
NELFB-201ENST00000343053 TEX264Q9Y6I9 313 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 LACTBL1A8MY62 500 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 GPR25O00155 361 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 PDGFRAP16234 1089 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 ETV4P43268 484 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 CDCA2Q69YH5 1023 aaPredicted RBP25.03■■□□□ 1.6
NELFB-201ENST00000343053 TRPM4Q8TD43 1214 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 SLC44A1Q8WWI5 657 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 CPB2Q96IY4 423 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 SRPK1Q96SB4 655 aaKnown RBP25.03■■□□□ 1.6
NELFB-201ENST00000343053 MCM3APO60318 1980 aa25.03■■□□□ 1.6
NELFB-201ENST00000343053 C19orf81C9J6K1 198 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 GYG2O15488 501 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 RBL1P28749 1068 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 NEK3P51956 506 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 YWHAZP63104 245 aaKnown RBP25.02■■□□□ 1.6
NELFB-201ENST00000343053 KRT81Q14533 505 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 RCN1Q15293 331 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 TAZQ16635 292 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 MAP1SQ66K74 1059 aaPredicted RBP25.02■■□□□ 1.6
NELFB-201ENST00000343053 C4orf50Q6ZRC1 276 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 CYP4V2Q6ZWL3 525 aaPredicted RBP25.02■■□□□ 1.6
NELFB-201ENST00000343053 ARMC2Q8NEN0 867 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 ZNF112Q9UJU3 913 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 KIF1CO43896 1103 aaKnown RBP25.02■■□□□ 1.6
NELFB-201ENST00000343053 HMGCRP04035 888 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 SERPINB4P48594 390 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 KCNJ11Q14654 390 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 PRKD1Q15139 912 aaPredicted RBP25.02■■□□□ 1.6
NELFB-201ENST00000343053 CCDC110Q8TBZ0 833 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 KLRG1Q96E93 195 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 MAGEB5Q9BZ81 275 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 NMUR2Q9GZQ4 415 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 LHX5Q9H2C1 402 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 EFR3BQ9Y2G0 817 aa25.02■■□□□ 1.6
NELFB-201ENST00000343053 MYO18AQ92614 2054 aaKnown RBP25.02■■□□□ 1.6
NELFB-201ENST00000343053 COPEO14579 308 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 SMNDC1O75940 238 aaKnown RBP eCLIP25.01■■□□□ 1.59
NELFB-201ENST00000343053 DLDP09622 509 aaKnown RBP25.01■■□□□ 1.59
NELFB-201ENST00000343053 GRM1Q13255 1194 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 NOMO1Q15155 1222 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 PPP6R3Q5H9R7 873 aaPredicted RBP25.01■■□□□ 1.59
NELFB-201ENST00000343053 FAM183BPQ6ZVS7 135 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 FBXO27Q8NI29 283 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 FNIP1Q8TF40 1166 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 WDR60Q8WVS4 1066 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 MCUR1Q96AQ8 359 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 PTCD3Q96EY7 689 aaKnown RBP25.01■■□□□ 1.59
NELFB-201ENST00000343053 RSAD1Q9HA92 442 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 CYP3A5P20815 502 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 CCDC6Q16204 474 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 CA9Q16790 459 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 CES4AQ5XG92 561 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 TMEM176AQ96HP8 235 aa25.01■■□□□ 1.59
NELFB-201ENST00000343053 ACAP3Q96P50 834 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms