RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ATXN3P54252 364 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 TAF1CQ15572 869 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 DCAF4L1Q3SXM0 396 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 DDIASQ8IXT1 998 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 MBOAT7Q96N66 472 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ARHGEF38Q9NXL2 777 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 DNAJC16Q9Y2G8 782 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 R3HDM2Q9Y2K5 976 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 DLG5Q8TDM6 1919 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 NRXN3Q9Y4C0 1643 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 FCHO1O14526 889 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 KIF1CO43896 1103 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 PMPCBO75439 489 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 KDELR1P24390 212 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 NCKAP1LP55160 1127 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 RTP1P59025 263 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 SLC38A7Q9NVC3 462 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 DRG1Q9Y295 367 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 NKRFO15226 690 aaKnown RBP eCLIP7.45□□□□□ -1.22
VCAN-202ENST00000342785 LIASO43766 372 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 TBC1D12O60347 775 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 JCHAINP01591 159 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CALB2P22676 271 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 PPARGP37231 505 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 MTFR1Q15390 333 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 KBTBD12Q3ZCT8 623 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 BBS12Q6ZW61 710 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 SLFN11Q7Z7L1 901 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 PHF13Q86YI8 300 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 LRRC43Q8N309 656 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ARHGAP18Q8N392 663 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 MFSD14AQ96MC6 490 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 TMEM237Q96Q45 408 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ACTL7BQ9Y614 415 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 E5RJQ4 531 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 AP1G2O75843 785 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 HMGCRP04035 888 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 RALBP11234 206 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CPB1P15086 417 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CYP2F1P24903 491 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 RPL22P35268 128 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 ELF3P78545 371 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 SLC20A2Q08357 652 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CAPSQ13938 189 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CNGA3Q16281 694 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 DENND1BQ6P3S1 775 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 HELQQ8TDG4 1101 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ZNF526Q8TF50 670 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 OLFM3Q96PB7 478 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 SLITRK1Q96PX8 696 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ZBTB18Q99592 522 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ILKAPQ9H0C8 392 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 LRRC40Q9H9A6 602 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 SIX2Q9NPC8 291 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 SLCO1B3Q9NPD5 702 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 PLIN4Q96Q06 1357 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 LACTBL1A8MY62 500 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 DCDC2CA8MYV0 355 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 PSMD3O43242 534 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 DGKIO75912 1065 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 ACADSP16219 412 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 RBL1P28749 1068 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SERPINB3P29508 390 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 GRIK1P39086 918 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 DPYSL3Q14195 570 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 TMEM259Q4ZIN3 620 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 GNASQ5JWF2 1037 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 FBXO47Q5MNV8 452 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SPATA2LQ8IUW3 424 aaPredicted RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 CEP70Q8NHQ1 597 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 CDC26Q8NHZ8 85 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 TMEM134Q9H6X4 195 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SHOX2O60902 331 aaPredicted RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 B3GAT3O94766 335 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 ASS1P00966 412 aaKnown RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 TCN1P20061 433 aaPredicted RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 JAM2P57087 298 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 DGKZQ13574 1117 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 PCSK7Q16549 785 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 LRRC8EQ6NSJ5 796 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.44□□□□□ -1.22
VCAN-202ENST00000342785 IFNEQ86WN2 208 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 LRRC15Q8TF66 581 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 LENG9Q96B70 501 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 OSMRQ99650 979 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 MRPL1Q9BYD6 325 aaKnown RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 KCNK1O00180 336 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 PLA2G6O60733 806 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 DNAJC8O75937 253 aaPredicted RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 F9P00740 461 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 UBTFL6P0CB48 400 aaPredicted RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 GRK2P25098 689 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 MGAT5Q09328 741 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 EEF1DP3Q658K8 133 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 TTC27Q6P3X3 843 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 POTEAQ6S8J7 498 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 KCNT2Q6UVM3 1135 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms