RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 SLC39A11Q8N1S5 342 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 ATAD1Q8NBU5 361 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 NAP1L3Q99457 506 aaPredicted RBP15.4■□□□□ 0.06
CBX3-201ENST00000337620 HTATIP2Q9BUP3 242 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 EPC1Q9H2F5 836 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 ZWILCHQ9H900 591 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 CNGB3Q9NQW8 809 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 SPG21Q9NZD8 308 aa15.4■□□□□ 0.06
CBX3-201ENST00000337620 TTC7AQ9ULT0 858 aaPredicted RBP15.4■□□□□ 0.06
CBX3-201ENST00000337620 TBC1D4O60343 1298 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 HSF2BPO75031 334 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 ZRANB2O95218 330 aaKnown RBP eCLIP15.39■□□□□ 0.05
CBX3-201ENST00000337620 EFEMP2O95967 443 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 ZBED1O96006 694 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 DESP17661 470 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 MIPP30301 263 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 YWHAZP63104 245 aaKnown RBP15.39■□□□□ 0.05
CBX3-201ENST00000337620 TUBB4BP68371 445 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 ITIH3Q06033 890 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 IFRD2Q12894 506 aaPredicted RBP15.39■□□□□ 0.05
CBX3-201ENST00000337620 SMC1AQ14683 1233 aaKnown RBP15.39■□□□□ 0.05
CBX3-201ENST00000337620 RAB6CQ53S08 254 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 LRRC38Q5VT99 294 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 KATNAL2Q8IYT4 538 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
CBX3-201ENST00000337620 FUBP3Q96I24 572 aaKnown RBP eCLIP15.39■□□□□ 0.05
CBX3-201ENST00000337620 RAB6CQ9H0N0 254 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 NGRNQ9NPE2 291 aaKnown RBP15.39■□□□□ 0.05
CBX3-201ENST00000337620 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.39■□□□□ 0.054e-9■□□□□ 8.8
CBX3-201ENST00000337620 CDY1Q9Y6F8 540 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 NLRC5Q86WI3 1866 aa15.39■□□□□ 0.05
CBX3-201ENST00000337620 DPYSL4O14531 572 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 RHOXF2BP0C7M4 288 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 RPL17P18621 184 aaKnown RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 IL1R2P27930 398 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 DAOAP59103 153 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 GPR17Q13304 367 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 PSMD5Q16401 504 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 DDR2Q16832 855 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SMTNL2Q2TAL5 461 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 KCNT1Q5JUK3 1230 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 RNF19BQ6ZMZ0 732 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 ARCQ7LC44 396 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 DEFB106AQ8N104 65 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 FIBCD1Q8N539 461 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 FBXO22Q8NEZ5 403 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SCAMP5Q8TAC9 235 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 FAM172AQ8WUF8 416 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 DPF3Q92784 378 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 RNF25Q96BH1 459 aaPredicted RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 RHOXF2Q9BQY4 288 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 OXCT2Q9BYC2 517 aaPredicted RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 PNPLA8Q9NP80 782 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 USP18Q9UMW8 372 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SLC4A7Q9Y6M7 1214 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 PTPRSQ13332 1948 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 PTPRDP23468 1912 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 YJEFN3A6XGL0 299 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 E7ENQ6 273 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 PI4K2BG5E9Z4 385 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SOD2P04179 222 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 TFE3P19532 575 aaPredicted RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 MATKP42679 507 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SLC25A11Q02978 314 aaKnown RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 CLUL1Q15846 466 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 DCAF6Q58WW2 860 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SDHAF4Q5VUM1 108 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SCYL2Q6P3W7 929 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 VSTM1Q6UX27 236 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 HFE2Q6ZVN8 426 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 RNF168Q8IYW5 571 aaPredicted RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 EXD1Q8NHP7 514 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 LBHD1Q9BQE6 289 aaPredicted RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 DDX23Q9BUQ8 820 aaKnown RBP15.38■□□□□ 0.05
CBX3-201ENST00000337620 AAASQ9NRG9 546 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 CHST7Q9NS84 486 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 SLC27A5Q9Y2P5 690 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 INSL6Q9Y581 213 aa15.38■□□□□ 0.05
CBX3-201ENST00000337620 CAPN9O14815 690 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 SART1O43290 800 aaKnown RBP15.37■□□□□ 0.05
CBX3-201ENST00000337620 KRT1P04264 644 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 KRT7P08729 469 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 PCK1P35558 622 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 PTPN9P43378 593 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 GPR15P49685 360 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 SLC5A3P53794 718 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 HTRA4P83105 476 aaPredicted RBP15.37■□□□□ 0.05
CBX3-201ENST00000337620 SLC13A5Q86YT5 568 aaPredicted RBP15.37■□□□□ 0.05
CBX3-201ENST00000337620 MMGT1Q8N4V1 131 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 TTC9BQ8N6N2 239 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 POPDC2Q9HBU9 364 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 DDX56Q9NY93 547 aaKnown RBP15.37■□□□□ 0.05
CBX3-201ENST00000337620 MTRRQ9UBK8 725 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 PCDHB12Q9Y5F1 795 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 MTMR11A4FU01 709 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 CARNS1A5YM72 827 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 DYNC1I1O14576 645 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms