RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CMPK2Q5EBM0 449 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 TFDP3Q5H9I0 405 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 KIAA0319LQ8IZA0 1049 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ST13P4Q8IZP2 240 aaPredicted RBP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 HIC2Q96JB3 615 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 TTC25Q96NG3 672 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 KCNK13Q9HB14 408 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 PXMP2Q9NR77 195 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ARHGEF4Q9NR80 690 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 POLIQ9UNA4 740 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CLUHO75153 1309 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 TTLL13PA6NNM8 815 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 TRIM49D1C9J1S8 452 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 E7ESA3 106 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 SOCS7O14512 581 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 MCF2LO15068 1137 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 RNF8O76064 485 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 TUBP50607 506 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 VCPP55072 806 aaKnown RBP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CDH6P55285 790 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ROR2Q01974 943 aaKnown RBP10.54□□□□□ -0.72
HIF1A-202ENST00000337138 BTKQ06187 659 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 KRT81Q14533 505 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CLNKQ7Z7G1 428 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CCDC110Q8TBZ0 833 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ASAP3Q8TDY4 903 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CISHQ9NSE2 258 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 ANKEF1Q9NU02 776 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 PCMTD2Q9NV79 361 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CNTN3Q9P232 1028 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 PACSIN3Q9UKS6 424 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 NR2E3Q9Y5X4 410 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 PLXNB2O15031 1838 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 MYLKQ15746 1914 aa10.54□□□□□ -0.72
HIF1A-202ENST00000337138 CYB561D2O14569 222 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 AHCYL1O43865 530 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 DGAT1O75907 488 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.723e-7■■□□□ 14.1
HIF1A-202ENST00000337138 ATP5HO75947 161 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 DHRS4L1P0CG22 281 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 TPBGLP0DKB5 382 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 CCND2P30279 289 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 RPL22P35268 128 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 HADHQ16836 314 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 C1orf146Q5VVC0 180 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SDCCAG8Q86SQ7 713 aaPredicted RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 MCPH1Q8NEM0 835 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 NMD3Q96D46 503 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 STARD13Q9Y3M8 1113 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 LOC100653049A0A140TA62 436 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 KBTBD13C9JR72 458 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 KRT34O76011 436 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 TOP3BO95985 862 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 VHLP40337 213 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 YARSP54577 528 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SP2Q02086 613 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SH2D4BQ5SQS7 431 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 RNASEH2BQ5TBB1 312 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 OR6B2Q6IFH4 312 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 FAM83AQ86UY5 434 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 MFN1Q8IWA4 741 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 POU5F2Q8N7G0 328 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 NIPA2Q8N8Q9 360 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 C10orf82Q8WW14 230 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 EZH1Q92800 747 aaPredicted RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SUDS3Q9H7L9 328 aaPredicted RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 PIDD1Q9HB75 910 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 CHCHD3Q9NX63 227 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 WASF2Q9Y6W5 498 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 DNAJC6O75061 913 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 WFS1O76024 890 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 DESP17661 470 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 SAT1P21673 171 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 PTPN4P29074 926 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 EML3Q32P44 896 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 FAM102AQ5T9C2 384 aaPredicted RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 TMCO4Q5TGY1 634 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 DENND1BQ6P3S1 775 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 RSPH3Q86UC2 560 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 TRIM50Q86XT4 487 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 ENDOVQ8N8Q3 282 aaKnown RBP10.53□□□□□ -0.72
HIF1A-202ENST00000337138 IFT43Q96FT9 208 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 APOL6Q9BWW8 343 aa10.53□□□□□ -0.72
HIF1A-202ENST00000337138 KCNN4O15554 427 aa10.52□□□□□ -0.72
HIF1A-202ENST00000337138 CCDC22O60826 627 aa10.52□□□□□ -0.72
HIF1A-202ENST00000337138 USP1O94782 785 aa10.52□□□□□ -0.72
HIF1A-202ENST00000337138 F7P08709 466 aaPredicted RBP10.52□□□□□ -0.72
HIF1A-202ENST00000337138 SFNP31947 248 aa10.52□□□□□ -0.72
HIF1A-202ENST00000337138 SH3PXD2AQ5TCZ1 1133 aa10.52□□□□□ -0.72
HIF1A-202ENST00000337138 CDCA2Q69YH5 1023 aaPredicted RBP10.52□□□□□ -0.72
HIF1A-202ENST00000337138 TTLL6Q8N841 843 aa10.52□□□□□ -0.72
HIF1A-202ENST00000337138 RNF149Q8NC42 400 aa10.52□□□□□ -0.72
HIF1A-202ENST00000337138 HEXIM2Q96MH2 286 aaKnown RBP10.52□□□□□ -0.72
HIF1A-202ENST00000337138 PHACTR1Q9C0D0 580 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms